RNA–Protein interactions for RNA: ENST00000556809.1

PABPN1-206, Transcript of poly(A) binding protein nuclear 1, humanhuman

TSL 2

Gene PABPN1, Length 969 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-206ENST00000556809 COLEC11Q9BWP8 271 aa24.56■■□□□ 1.52
PABPN1-206ENST00000556809 EXOC1Q9NV70 894 aa24.56■■□□□ 1.52
PABPN1-206ENST00000556809 ANKFY1Q9P2R3 1169 aa24.56■■□□□ 1.52
PABPN1-206ENST00000556809 CACNG4Q9UBN1 327 aa24.56■■□□□ 1.52
PABPN1-206ENST00000556809 BARX2Q9UMQ3 279 aaPredicted RBP24.56■■□□□ 1.52
PABPN1-206ENST00000556809 CLASP2O75122 1294 aaKnown RBP24.55■■□□□ 1.52
PABPN1-206ENST00000556809 BMS1Q14692 1282 aaKnown RBP24.55■■□□□ 1.52
PABPN1-206ENST00000556809 RABGGTAQ92696 567 aa24.55■■□□□ 1.52
PABPN1-206ENST00000556809 HERC2P3Q9BVR0 1158 aa24.55■■□□□ 1.52
PABPN1-206ENST00000556809 CCDC94Q9BW85 323 aaPredicted RBP24.55■■□□□ 1.52
PABPN1-206ENST00000556809 CD207Q9UJ71 328 aa24.55■■□□□ 1.52
PABPN1-206ENST00000556809 EXOC7Q9UPT5 735 aa24.55■■□□□ 1.52
PABPN1-206ENST00000556809 PDCD11Q14690 1871 aaKnown RBP24.55■■□□□ 1.52
PABPN1-206ENST00000556809 MUC3AQ02505 3323 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP24.54■■□□□ 1.52
PABPN1-206ENST00000556809 CLDN3O15551 220 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 MBTPS2O43462 519 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 PRPF6O94906 941 aaKnown RBP24.54■■□□□ 1.52
PABPN1-206ENST00000556809 OSTNP61366 133 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 KCNA1Q09470 495 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 PNOCQ13519 176 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 HSP90AA2PQ14568 343 aaPredicted RBP24.54■■□□□ 1.52
PABPN1-206ENST00000556809 NOLC1Q14978 699 aaKnown RBP eCLIP24.54■■□□□ 1.52
PABPN1-206ENST00000556809 CLUL1Q15846 466 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 CCDC47Q96A33 483 aaKnown RBP24.54■■□□□ 1.52
PABPN1-206ENST00000556809 ACAP3Q96P50 834 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 CHST7Q9NS84 486 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 HOOK1Q9UJC3 728 aaKnown RBP24.54■■□□□ 1.52
PABPN1-206ENST00000556809 ADAM28Q9UKQ2 775 aa24.54■■□□□ 1.52
PABPN1-206ENST00000556809 NCOR1O75376 2440 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 SMIM28A0A1B0GU29 152 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 EIF3DO15371 548 aaKnown RBP eCLIP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 HARSP12081 509 aaKnown RBP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 MATR3P43243 847 aaKnown RBP eCLIP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 YARSP54577 528 aaKnown RBP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 PSMD2Q13200 908 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 SMAD4Q13485 552 aaKnown RBP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 GLRA4Q5JXX5 417 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 KIAA0319Q5VV43 1072 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 SLC39A4Q6P5W5 647 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 EPM2AIP1Q7L775 607 aaPredicted RBP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 ELOA2Q8IYF1 753 aaPredicted RBP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 SMRP1Q8NCR6 262 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 SNX27Q96L92 541 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 ZMAT2Q96NC0 199 aaKnown RBP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 GPR62Q9BZJ7 368 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 TMEM206Q9H813 350 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 SLC39A2Q9NP94 309 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 TOPORSQ9NS56 1045 aaPredicted RBP24.53■■□□□ 1.52
PABPN1-206ENST00000556809 LMBRD1Q9NUN5 540 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 HCFC2Q9Y5Z7 792 aa24.53■■□□□ 1.52
PABPN1-206ENST00000556809 CASTOR2A6NHX0 329 aa24.52■■□□□ 1.52
PABPN1-206ENST00000556809 GOLGA6L22H0YM25 854 aa24.52■■□□□ 1.52
PABPN1-206ENST00000556809 FAM189A1O60320 539 aa24.52■■□□□ 1.52
PABPN1-206ENST00000556809 SMAD2Q15796 467 aaKnown RBP24.52■■□□□ 1.52
PABPN1-206ENST00000556809 FUT10Q6P4F1 479 aa24.52■■□□□ 1.52
PABPN1-206ENST00000556809 SYCP3Q8IZU3 236 aa24.52■■□□□ 1.52
PABPN1-206ENST00000556809 IKZF4Q9H2S9 585 aa24.52■■□□□ 1.52
PABPN1-206ENST00000556809 CNTN3Q9P232 1028 aa24.52■■□□□ 1.52
PABPN1-206ENST00000556809 UBE4BO95155 1302 aa24.52■■□□□ 1.52
PABPN1-206ENST00000556809 ANKRD63C9JTQ0 380 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 RHOBTB3O94955 611 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 KCNE1P15382 129 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 DSG1Q02413 1049 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 STK4Q13043 487 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 KCNB1Q14721 858 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 SLC10A6Q3KNW5 377 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 SEZ6Q53EL9 994 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 ANKRD54Q6NXT1 300 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 LLGL2Q6P1M3 1020 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 ZNF507Q8TCN5 953 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 SLC22A17Q8WUG5 538 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 SCFD1Q8WVM8 642 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 KLHL5Q96PQ7 755 aa24.51■■□□□ 1.51
PABPN1-206ENST00000556809 MRPL17Q9NRX2 175 aaKnown RBP24.51■■□□□ 1.51
PABPN1-206ENST00000556809 A0A0B4J269 797 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 TISP43B9A030 160 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 TNFRSF10AO00220 468 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 KIF4AO95239 1232 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 CNPP09543 421 aaKnown RBP24.5■■□□□ 1.51
PABPN1-206ENST00000556809 CA8P35219 290 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 SOX4Q06945 474 aaPredicted RBP24.5■■□□□ 1.51
PABPN1-206ENST00000556809 SLFN12LQ6IEE8 588 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 SYCE2Q6PIF2 218 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 KIAA0895Q8NCT3 520 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 S1PR5Q9H228 398 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 RXFP1Q9HBX9 757 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 FAM50BQ9Y247 325 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 STYXL1Q9Y6J8 313 aa24.5■■□□□ 1.51
PABPN1-206ENST00000556809 TMEM189-UBE2V1I3L0A0 370 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 TADA2AO75478 443 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 SMC2O95347 1197 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 URODP06132 367 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 SRGAP2BP0DMP2 458 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 IGFBP6P24592 240 aaPredicted RBP24.49■■□□□ 1.51
PABPN1-206ENST00000556809 HOXD13P35453 343 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 GLUD2P49448 558 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 UPP1Q16831 310 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 BMT2Q1RMZ1 405 aa24.49■■□□□ 1.51
PABPN1-206ENST00000556809 CD300LGQ6UXG3 332 aa24.49■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms