RNA–Protein interactions for RNA: ENST00000556718.1

PRPF39-210, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 499 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-210ENST00000556718 SLC46A2Q9BY10 475 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 ANO3Q9BYT9 981 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 OSBPL6Q9BZF3 934 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 ZNF700Q9H0M5 742 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 QRSL1Q9H0R6 528 aaKnown RBP5.5□□□□□ -1.53
PRPF39-210ENST00000556718 TRPM5Q9NZQ8 1165 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PCDHGA9Q9Y5G4 932 aaKnown RBP5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PCDHGA8Q9Y5G5 932 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PCDHGA7Q9Y5G6 932 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PCDHGA6Q9Y5G7 932 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PCDHGA3Q9Y5H0 932 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 PCDHGA2Q9Y5H1 932 aa5.5□□□□□ -1.53
PRPF39-210ENST00000556718 LCHNA4D1U4 455 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 TMEM200CA6NKL6 621 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 OPHN1O60890 802 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 NCR1O76036 304 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 PRPF6O94906 941 aaKnown RBP5.49□□□□□ -1.53
PRPF39-210ENST00000556718 LPOP22079 712 aaPredicted RBP5.49□□□□□ -1.53
PRPF39-210ENST00000556718 CD38P28907 300 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 PTH2RP49190 550 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 PICALMQ13492 652 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 VPS72Q15906 364 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.49□□□□□ -1.53
PRPF39-210ENST00000556718 TOR2AQ5JU69 321 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 SYCP2LQ5T4T6 812 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 EPM2AIP1Q7L775 607 aaPredicted RBP5.49□□□□□ -1.53
PRPF39-210ENST00000556718 RD3Q7Z3Z2 195 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 SMC5Q8IY18 1101 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.49□□□□□ -1.53
PRPF39-210ENST00000556718 AUTS2Q8WXX7 1259 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 JADE3Q92613 823 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 MPHOSPH6Q99547 160 aaKnown RBP5.49□□□□□ -1.53
PRPF39-210ENST00000556718 NOL10Q9BSC4 688 aaKnown RBP5.49□□□□□ -1.53
PRPF39-210ENST00000556718 TEX101Q9BY14 249 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 EPC1Q9H2F5 836 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 POFUT1Q9H488 388 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 C1orf112Q9NSG2 853 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 SYBUQ9NX95 663 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 SAP30BPQ9UHR5 308 aaKnown RBP5.49□□□□□ -1.53
PRPF39-210ENST00000556718 SYNPO2Q9UMS6 1093 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 COX11Q9Y6N1 276 aa5.49□□□□□ -1.53
PRPF39-210ENST00000556718 FRMPD2Q68DX3 1309 aaPredicted RBP5.48□□□□□ -1.53
PRPF39-210ENST00000556718 LEFTY2O00292 366 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 DTNBO60941 627 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 ALDH1A2O94788 518 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 TRIM27P14373 513 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 TYRP1P17643 537 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 AGXTP21549 392 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 SLC16A1P53985 500 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 MANFP55145 182 aaKnown RBP5.48□□□□□ -1.53
PRPF39-210ENST00000556718 ADKP55263 362 aaKnown RBP5.48□□□□□ -1.53
PRPF39-210ENST00000556718 MRPS9P82933 396 aaKnown RBP5.48□□□□□ -1.53
PRPF39-210ENST00000556718 SRSF2Q01130 221 aaKnown RBP5.48□□□□□ -1.53
PRPF39-210ENST00000556718 TAP1Q03518 808 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 CD69Q07108 199 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 GBX1Q14549 363 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 CT83Q5H943 113 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 CCDC62Q6P9F0 684 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 XYLT1Q86Y38 959 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 SUPT20HQ8NEM7 779 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 OR5M3Q8NGP4 307 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 RSAD2Q8WXG1 361 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 EAF2Q96CJ1 260 aaPredicted RBP5.48□□□□□ -1.53
PRPF39-210ENST00000556718 MAN1C1Q9NR34 630 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 DKK2Q9UBU2 259 aa5.48□□□□□ -1.53
PRPF39-210ENST00000556718 EPN1Q9Y6I3 576 aaPredicted RBP5.48□□□□□ -1.53
PRPF39-210ENST00000556718 AP1G1O43747 822 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 CTNND1O60716 968 aaKnown RBP5.47□□□□□ -1.53
PRPF39-210ENST00000556718 FSBPO95073 299 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 IFIT2P09913 472 aaKnown RBP5.47□□□□□ -1.53
PRPF39-210ENST00000556718 CLEC2LP0C7M8 214 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 OSMP13725 252 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 MTNR1BP49286 362 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 USP14P54578 494 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 MRPL49Q13405 166 aaKnown RBP5.47□□□□□ -1.53
PRPF39-210ENST00000556718 METTL24Q5JXM2 366 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 KIAA1841Q6NSI8 718 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 FBXO42Q6P3S6 717 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 GDF7Q7Z4P5 450 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 FAM83AQ86UY5 434 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 ARHGEF19Q8IW93 802 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 GLB1L3Q8NCI6 653 aaPredicted RBP5.47□□□□□ -1.53
PRPF39-210ENST00000556718 PPP1R14CQ8TAE6 165 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 PDCD2LQ9BRP1 358 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 SARGQ9BW04 601 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 AKIP1Q9NQ31 210 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 ANLNQ9NQW6 1124 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 ZNF277Q9NRM2 450 aaPredicted RBP5.47□□□□□ -1.53
PRPF39-210ENST00000556718 USP25Q9UHP3 1055 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 EDARQ9UNE0 448 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 CHST2Q9Y4C5 530 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 PPP2R3BQ9Y5P8 575 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 SPATA31A6Q5VVP1 1343 aa5.47□□□□□ -1.53
PRPF39-210ENST00000556718 NRP1O14786 923 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 ZNF185O15231 689 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 NDUFS2O75306 463 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 ZRANB2O95218 330 aaKnown RBP eCLIP5.46□□□□□ -1.54
PRPF39-210ENST00000556718 NDUFA10O95299 355 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 PLA2G5P39877 138 aa5.46□□□□□ -1.54
PRPF39-210ENST00000556718 KIF23Q02241 960 aaPredicted RBP5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms