RNA–Protein interactions for RNA: ENST00000556541.1

FOXN3-212, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 388 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-212ENST00000556541 DUOXA2Q1HG44 320 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 ZACNQ401N2 412 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 NOMO2Q5JPE7 1267 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 CLLU1OSQ5K130 101 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 C1orf220Q5T0J3 134 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.2□□□□□ -0.46
FOXN3-212ENST00000556541 CMTR2Q8IYT2 770 aaKnown RBP12.2□□□□□ -0.46
FOXN3-212ENST00000556541 URGCPQ8TCY9 931 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 PLEKHO2Q8TD55 490 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 UROC1Q96N76 676 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 RPS6KC1Q96S38 1066 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 TUBGCP2Q9BSJ2 902 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 RNF39Q9H2S5 420 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 TMEM8AQ9HCN3 771 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 PARP2Q9UGN5 583 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 DAAM1Q9Y4D1 1078 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 HES2Q9Y543 173 aa12.2□□□□□ -0.46
FOXN3-212ENST00000556541 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.2□□□□□ -0.46
FOXN3-212ENST00000556541 FSD2A1L4K1 749 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 GJB5O95377 273 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 AFPP02771 609 aaKnown RBP12.19□□□□□ -0.46
FOXN3-212ENST00000556541 C4BPAP04003 597 aaKnown RBP12.19□□□□□ -0.46
FOXN3-212ENST00000556541 THP07101 528 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 AKAP5P24588 427 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 RPL9P32969 192 aaKnown RBP12.19□□□□□ -0.46
FOXN3-212ENST00000556541 MTIF2P46199 727 aaKnown RBP12.19□□□□□ -0.46
FOXN3-212ENST00000556541 FXR1P51114 621 aaKnown RBP eCLIP12.19□□□□□ -0.46
FOXN3-212ENST00000556541 OSTNP61366 133 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 DSC1Q08554 894 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 TMEM132DQ14C87 1099 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 MIIPQ5JXC2 388 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 EFCAB13Q8IY85 973 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 LRRC43Q8N309 656 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 RDH13Q8NBN7 331 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 BEST2Q8NFU1 509 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
FOXN3-212ENST00000556541 DDX27Q96GQ7 796 aaKnown RBP12.19□□□□□ -0.46
FOXN3-212ENST00000556541 ANKRD36BP1Q96IX9 119 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 CASD1Q96PB1 797 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 GAD1Q99259 594 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 TMEM175Q9BSA9 504 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 RBSNQ9H1K0 784 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 FAM124BQ9H5Z6 455 aaPredicted RBP12.19□□□□□ -0.46
FOXN3-212ENST00000556541 VRTNQ9H8Y1 702 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 PDE11AQ9HCR9 933 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 ITGA11Q9UKX5 1188 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 SLC4A7Q9Y6M7 1214 aa12.19□□□□□ -0.46
FOXN3-212ENST00000556541 KIAA1671Q9BY89 1806 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 A0A1B0GTH6 734 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 A0A1W2PPC1 479 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 ANO9A1A5B4 782 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 MEIS3P2A8K0S8 358 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 LGALS16A8MUM7 142 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 TMEM189-UBE2V1I3L0A0 370 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 ZC3H11AO75152 810 aaKnown RBP eCLIP12.18□□□□□ -0.46
FOXN3-212ENST00000556541 TNNC2P02585 160 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 CDK11BP21127 795 aaKnown RBP12.18□□□□□ -0.46
FOXN3-212ENST00000556541 MLH1P40692 756 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 FMO5P49326 533 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 COPB1P53618 953 aaKnown RBP12.18□□□□□ -0.46
FOXN3-212ENST00000556541 WNT7BP56706 349 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 DEFB103AP81534 67 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 CETN1Q12798 172 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 KCNH2Q12809 1159 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 TUSC3Q13454 348 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 VWA3BQ502W6 1294 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 SEZ6Q53EL9 994 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 KRT39Q6A163 491 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 JADE1Q6IE81 842 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 OTOP2Q7RTS6 562 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 ABI1Q8IZP0 508 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 LRRC52Q8N7C0 313 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 CXorf38Q8TB03 319 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 TAF4BQ92750 862 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 LPPQ93052 612 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 ZMAT2Q96NC0 199 aaKnown RBP12.18□□□□□ -0.46
FOXN3-212ENST00000556541 PRO3102Q9H379 93 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 NDST4Q9H3R1 872 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 GBF1Q92538 1859 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 CEP290O15078 2479 aa12.18□□□□□ -0.46
FOXN3-212ENST00000556541 NLRC5Q86WI3 1866 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 A0A1W2PQC6 194 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 H0YGN5 161 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 CBFA2T2O43439 604 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 TPM3P06753 285 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 NFICP08651 508 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 TMEM191BP0C7N4 346 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 ATP1A3P13637 1013 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 TNNI1P19237 187 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 ATICP31939 592 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 PNPLA4P41247 253 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 MXI1P50539 228 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 DLG4P78352 724 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 FANCCQ00597 558 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 PPP3CAQ08209 521 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 FILIP1LQ4L180 1135 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 SV2AQ7L0J3 742 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 TRAPPC11Q7Z392 1133 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 HERC6Q8IVU3 1022 aa12.17□□□□□ -0.46
FOXN3-212ENST00000556541 HELQQ8TDG4 1101 aa12.17□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms