RNA–Protein interactions for RNA: ENST00000556412.4

VIPAS39-208, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-208ENST00000556412 MTUS1Q9ULD2 1270 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 A0A1W2PPC1 479 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 INPPL1O15357 1258 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 DDHD2O94830 711 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 TMEM191BP0C7N4 346 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 VAMP7P51809 220 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 GUCY2FP51841 1108 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 POU5F1Q01860 360 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 SURF1Q15526 300 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 LRSAM1Q6UWE0 723 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 INTS8Q75QN2 995 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 FILIP1Q7Z7B0 1213 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 EFCAB13Q8IY85 973 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 TMEM130Q8N3G9 435 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 ENOX1Q8TC92 643 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 RSPH1Q8WYR4 309 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 MFSD14AQ96MC6 490 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 PPP1R10Q96QC0 940 aaKnown RBP15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 MKNK1Q9BUB5 465 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 TSPY26PQ9H489 355 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 SLC38A7Q9NVC3 462 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 DNAJB4Q9UDY4 337 aa15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 ARMCX3Q9UH62 379 aaPredicted RBP15.22■□□□□ 0.03
VIPAS39-208ENST00000556412 BECN2A8MW95 431 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 B4GALT3O60512 393 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 TRIM49P0CI25 452 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 TRIM49CP0CI26 452 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 DNAJB2P25686 324 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 OR1G1P47890 313 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 DLG4P78352 724 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 BFSP1Q12934 665 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 TUSC3Q13454 348 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 USP37Q86T82 979 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 BEST2Q8NFU1 509 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 PLEKHO2Q8TD55 490 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 SP7Q8TDD2 431 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 CNOT6LQ96LI5 555 aaKnown RBP15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 NRDE2Q9H7Z3 1164 aa15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 MAGEC2Q9UBF1 373 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 UBQLN1Q9UMX0 589 aaKnown RBP15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 PRG3Q9Y2Y8 225 aaPredicted RBP15.21■□□□□ 0.03
VIPAS39-208ENST00000556412 PTPRJQ12913 1337 aa15.21■□□□□ 0.02
VIPAS39-208ENST00000556412 CEP290O15078 2479 aa15.21■□□□□ 0.02
VIPAS39-208ENST00000556412 LINC01553A4QN01 128 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 LRRIQ3A6PVS8 624 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 MAPK13O15264 365 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 XPOTO43592 962 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 ARHGEF15O94989 841 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 GNA14O95837 355 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 SOX4Q06945 474 aaPredicted RBP15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 PPP2R2DQ66LE6 453 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 WDR49Q8IV35 697 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 OR5B17Q8NGF7 314 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 PARD3BQ8TEW8 1205 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 CGRRF1Q99675 332 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 MTMR12Q9C0I1 747 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 THAP9Q9H5L6 903 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 CWH43Q9H720 699 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 SLC28A3Q9HAS3 691 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 SAMSN1Q9NSI8 373 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 FANCLQ9NW38 375 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 DERAQ9Y315 318 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 C2CD2Q9Y426 696 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 MICAL3Q7RTP6 2002 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 NT5C1B-RDH14C9J2C7 533 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 CLSTN1O94985 981 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 TNNC2P02585 160 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 LAG3P18627 525 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 ALDH7A1P49419 539 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 SMAD3P84022 425 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 FAM114A1Q8IWE2 563 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 COLGALT2Q8IYK4 626 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 TMC2Q8TDI7 906 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 CACTINQ8WUQ7 758 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 TIFAQ96CG3 184 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 ANKRD36BP1Q96IX9 119 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 PAAF1Q9BRP4 392 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 CERS4Q9HA82 394 aa15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 METTL14Q9HCE5 456 aaKnown RBP15.2■□□□□ 0.02
VIPAS39-208ENST00000556412 RANBP2P49792 3224 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 KRT19P08727 400 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 CTNNB1P35222 781 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 MTIF2P46199 727 aaKnown RBP15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 SLC11A1P49279 550 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 CLCNKBP51801 687 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 BCAR1P56945 870 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 DSC1Q08554 894 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 BIRC3Q13489 604 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 NAB2Q15742 525 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 DUOXA2Q1HG44 320 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 LRIT3Q3SXY7 679 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 SPRED2Q7Z698 418 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 FRMD5Q7Z6J6 570 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 LUZP1Q86V48 1076 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 HASPINQ8TF76 798 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 ZNF558Q96NG5 402 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 BPIFA3Q9BQP9 254 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 C17orf80Q9BSJ5 609 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 CBX8Q9HC52 389 aa15.19■□□□□ 0.02
VIPAS39-208ENST00000556412 AAASQ9NRG9 546 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms