RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 AGRPO00253 132 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ZBTB43O43298 467 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 PLA2G6O60733 806 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 PAPLNO95428 1278 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 SGPL1O95470 568 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 CFBP00751 764 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ICAM1P05362 532 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ITGAVP06756 1048 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 HMGB1P09429 215 aaKnown RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 CALM1P0DP23 149 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 CALM2P0DP24 149 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 CALM3P0DP25 149 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 MYCLP12524 364 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 HSPA4P34932 840 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 KIR2DL1P43626 348 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 KIR2DL2P43627 348 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 CCT2P78371 535 aaKnown RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 STK3Q13188 491 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 GRB10Q13322 594 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 BAATQ14032 418 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 GRM4Q14833 912 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 KCNMB1Q16558 191 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 QRICH1Q2TAL8 776 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 TKFCQ3LXA3 575 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 GTF2IRD2BQ6EKJ0 949 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 OGFOD2Q6N063 350 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 RNF207Q6ZRF8 634 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 CEP128Q6ZU80 1094 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 GTF2IRD2Q86UP8 949 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 MICU3Q86XE3 530 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ZSWIM9Q86XI8 627 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 FANCBQ8NB91 859 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ABHD4Q8TB40 342 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 TBC1D5Q92609 795 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 RRP36Q96EU6 259 aaKnown RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ASIC4Q96FT7 647 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 MAML3Q96JK9 1138 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ZNF333Q96JL9 665 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 PIGSQ96S52 555 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 MCMBPQ9BTE3 642 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 XRN2Q9H0D6 950 aaKnown RBP eCLIP5.35□□□□□ -1.551e-11■■■■□ 25.2
ATXN3-237ENST00000556274 EPN3Q9H201 632 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 JMJD4Q9H9V9 463 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 LY9Q9HBG7 655 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 PDRG1Q9NUG6 133 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ERVK13-1Q9NX77 482 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 SIRPGQ9P1W8 387 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 TNFRSF10DQ9UBN6 386 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 SEC63Q9UGP8 760 aaKnown RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 MAD2L2Q9UI95 211 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ZHX1Q9UKY1 873 aaPredicted RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 CNPY2Q9Y2B0 182 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 MRPL11Q9Y3B7 192 aaKnown RBP5.35□□□□□ -1.55
ATXN3-237ENST00000556274 PCDHA1Q9Y5I3 950 aa5.35□□□□□ -1.55
ATXN3-237ENST00000556274 ZNF536O15090 1300 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 C2orf71A6NGG8 1288 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 GOLGA8AA7E2F4 631 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 GOLGA8BA8MQT2 603 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 B4DLN1 442 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 SH2B2O14492 632 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 AURKAO14965 403 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 EIF5BO60841 1220 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 GJB1P08034 283 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 RPS6KB1P23443 525 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 HOXA13P31271 388 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 NT5C2P49902 561 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 SEPHS1P49903 392 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 GNAQP50148 359 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 MRPL12P52815 198 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 OAZ1P54368 228 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 RTP1P59025 263 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 EXOSC10Q01780 885 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 AKAP17AQ02040 695 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 GRB14Q14449 540 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 NR0B2Q15466 257 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 SLC10A6Q3KNW5 377 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 GJC2Q5T442 439 aaPredicted RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 ARHGEF16Q5VV41 709 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 BTNL9Q6UXG8 535 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 RUFY3Q7L099 469 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 JAMLQ86YT9 394 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 TRIM59Q8IWR1 403 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 ABRAQ8N0Z2 381 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 LILRA2Q8N149 483 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 REPS2Q8NFH8 660 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 U2AF1L4Q8WU68 220 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 FAM168AQ92567 244 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 USP6NLQ92738 828 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 CUL5Q93034 780 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 FERMT2Q96AC1 680 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 MRGPRX3Q96LB0 322 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 MPHOSPH6Q99547 160 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 AMNQ9BXJ7 453 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 UPF3BQ9BZI7 483 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 RANBP17Q9H2T7 1088 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 SP110Q9HB58 689 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 A1CFQ9NQ94 594 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 ADD3Q9UEY8 706 aaKnown RBP5.34□□□□□ -1.55
ATXN3-237ENST00000556274 BACE2Q9Y5Z0 518 aa5.34□□□□□ -1.55
ATXN3-237ENST00000556274 DDX49Q9Y6V7 483 aaKnown RBP5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms