RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 CUL4BQ13620 913 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 PTCRAQ6ISU1 281 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-217ENST00000556203 KIAA1841Q6NSI8 718 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 UNC13DQ70J99 1090 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 SYCP3Q8IZU3 236 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 FSIP1Q8NA03 581 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 ADAMTS19Q8TE59 1207 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 C18orf25Q96B23 403 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-217ENST00000556203 B3GALT6Q96L58 329 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 UROC1Q96N76 676 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 COL25A1Q9BXS0 654 aaPredicted RBP16.56■□□□□ 0.24
ACTN1-217ENST00000556203 RPF1Q9H9Y2 349 aaKnown RBP16.56■□□□□ 0.24
ACTN1-217ENST00000556203 USP25Q9UHP3 1055 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 STYXL1Q9Y6J8 313 aa16.56■□□□□ 0.24
ACTN1-217ENST00000556203 UNC80Q8N2C7 3258 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 LILRB3O75022 631 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 B3GAT3O94766 335 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 SRGAP2BP0DMP2 458 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 ADSSP30520 456 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 DSG1Q02413 1049 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 PPP2R3AQ06190 1150 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 SPAG1Q07617 926 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 KCNC3Q14003 757 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
ACTN1-217ENST00000556203 UPP1Q16831 310 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 PUS10Q3MIT2 529 aaKnown RBP16.55■□□□□ 0.24
ACTN1-217ENST00000556203 FAM26FQ5R3K3 315 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 STXBP4Q6ZWJ1 553 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 GLIS3Q8NEA6 775 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 POMGNT1Q8WZA1 660 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 DDX27Q96GQ7 796 aaKnown RBP16.55■□□□□ 0.24
ACTN1-217ENST00000556203 MSLNLQ96KJ4 702 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 KLHL5Q96PQ7 755 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 EMILIN2Q9BXX0 1053 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 GOLPH3LQ9H4A5 285 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 TMEM206Q9H813 350 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 CD207Q9UJ71 328 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 CPSF3Q9UKF6 684 aaKnown RBP16.55■□□□□ 0.24
ACTN1-217ENST00000556203 AGO2Q9UKV8 859 aaKnown RBP16.55■□□□□ 0.24
ACTN1-217ENST00000556203 SSX2IPQ9Y2D8 614 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 HCFC2Q9Y5Z7 792 aa16.55■□□□□ 0.24
ACTN1-217ENST00000556203 PVALEFA0A1B0GWK0 134 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 TTC26A0AVF1 554 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 LACTBL1A8MY62 500 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 TMEM189-UBE2V1I3L0A0 370 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 PODXLO00592 558 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 CNPP09543 421 aaKnown RBP16.54■□□□□ 0.24
ACTN1-217ENST00000556203 IL9P15248 144 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 IGFBP6P24592 240 aaPredicted RBP16.54■□□□□ 0.24
ACTN1-217ENST00000556203 ANP32AP39687 249 aaKnown RBP16.54■□□□□ 0.24
ACTN1-217ENST00000556203 ACOT2P49753 483 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 POSTNQ15063 836 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 USP41Q3LFD5 358 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 KIAA0319Q5VV43 1072 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 DCLRE1AQ6PJP8 1040 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 TMEM184AQ6ZMB5 413 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 CASP10Q92851 521 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 FAM212AQ96EL1 285 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 KIF12Q96FN5 646 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 CHST7Q9NS84 486 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 TUBGCP4Q9UGJ1 667 aa16.54■□□□□ 0.24
ACTN1-217ENST00000556203 REV3LO60673 3130 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 TDRD15B5MCY1 1934 aaKnown RBP16.53■□□□□ 0.24
ACTN1-217ENST00000556203 XIRP2A4UGR9 3374 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 GRXCR2A6NFK2 248 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 DLL1O00548 723 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 KLRC2P26717 231 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 EHHADHQ08426 723 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 ELAVL2Q12926 359 aaKnown RBP16.53■□□□□ 0.24
ACTN1-217ENST00000556203 SMAD4Q13485 552 aaKnown RBP16.53■□□□□ 0.24
ACTN1-217ENST00000556203 FAM171A1Q5VUB5 890 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 ANKRD54Q6NXT1 300 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 CD300LGQ6UXG3 332 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 CEP57Q86XR8 500 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 C3orf58Q8NDZ4 430 aa16.53■□□□□ 0.24
ACTN1-217ENST00000556203 RIN2Q8WYP3 895 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-217ENST00000556203 NECAB3Q96P71 396 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-217ENST00000556203 UHRF1Q96T88 793 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-217ENST00000556203 CIZ1Q9ULV3 898 aaPredicted RBP16.53■□□□□ 0.24
ACTN1-217ENST00000556203 EIF3DO15371 548 aaKnown RBP eCLIP16.52■□□□□ 0.24
ACTN1-217ENST00000556203 TEX28O15482 410 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 MBTPS2O43462 519 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 ADRB2P07550 413 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 EPCAMP16422 314 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 RPL9P32969 192 aaKnown RBP16.52■□□□□ 0.24
ACTN1-217ENST00000556203 RTP2Q5QGT7 225 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 EPM2AIP1Q7L775 607 aaPredicted RBP16.52■□□□□ 0.24
ACTN1-217ENST00000556203 PPFIBP1Q86W92 1011 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 CD302Q8IX05 232 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 TMEM130Q8N3G9 435 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 SMRP1Q8NCR6 262 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 SLC22A17Q8WUG5 538 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 SAAL1Q96ER3 474 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 CBWD1Q9BRT8 395 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 FAM213AQ9BRX8 229 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 TTPALQ9BTX7 342 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 RXFP1Q9HBX9 757 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 SLC39A2Q9NP94 309 aa16.52■□□□□ 0.24
ACTN1-217ENST00000556203 UBQLN1Q9UMX0 589 aaKnown RBP16.52■□□□□ 0.24
ACTN1-217ENST00000556203 FAM50BQ9Y247 325 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms