RNA–Protein interactions for RNA: ENST00000555840.5

SLC39A9-207, Transcript of solute carrier family 39 member 9, humanhuman

TSL 2

Gene SLC39A9, Length 2,377 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC39A9-207ENST00000555840 WNK4Q96J92 1243 aa13.4□□□□□ -0.26
SLC39A9-207ENST00000555840 SH3GL1Q99961 368 aa13.4□□□□□ -0.26
SLC39A9-207ENST00000555840 ADAM7Q9H2U9 754 aa13.4□□□□□ -0.26
SLC39A9-207ENST00000555840 SH3GLB2Q9NR46 395 aa13.4□□□□□ -0.26
SLC39A9-207ENST00000555840 FBXO28Q9NVF7 368 aa13.4□□□□□ -0.26
SLC39A9-207ENST00000555840 FAIMQ9NVQ4 179 aa13.4□□□□□ -0.26
SLC39A9-207ENST00000555840 BARHL2Q9NY43 387 aa13.4□□□□□ -0.26
SLC39A9-207ENST00000555840 LIMA1Q9UHB6 759 aaKnown RBP13.4□□□□□ -0.26
SLC39A9-207ENST00000555840 SUN1O94901 812 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 UNC5CO95185 931 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 ZBTB48P10074 688 aaPredicted RBP13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 ARFIP2P53365 341 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 COPB1P53618 953 aaKnown RBP13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 LMNB2Q03252 620 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 TRIM29Q14134 588 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 CFAP221Q4G0U5 840 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 WASHC2DQ5SRD0 308 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 KRT40Q6A162 431 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 OLFM3Q96PB7 478 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 ISCUQ9H1K1 167 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 CCDC134Q9H6E4 229 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 DCLRE1BQ9H816 532 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 TAB2Q9NYJ8 693 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 VPS54Q9P1Q0 977 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 LRWD1Q9UFC0 647 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 COBLO75128 1261 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 TXKP42681 527 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 MMP13P45452 471 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 SNAPC2Q13487 334 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 GSTA3Q16772 222 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 LRRC8BQ6P9F7 803 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 MARK2Q7KZI7 788 aaKnown RBP13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 SH3TC2Q8TF17 1288 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 GPKOWQ92917 476 aaPredicted RBP eCLIP13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 SHISA4Q96DD7 197 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 NAP1L3Q99457 506 aaPredicted RBP13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 DRC3Q9H069 523 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 PPP1R9AQ9ULJ8 1098 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 TSC22D4Q9Y3Q8 395 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 FAM32AQ9Y421 112 aaKnown RBP13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 SMCHD1A6NHR9 2005 aa13.39□□□□□ -0.27
SLC39A9-207ENST00000555840 HGSO14964 777 aaPredicted RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 RAD51CO43502 376 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 GJB6O95452 261 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 PABPC4LP0CB38 370 aaKnown RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 CDK4P11802 303 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 IFNAR2P48551 515 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 CCT8P50990 548 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 CYLC2Q14093 348 aaPredicted RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 QRICH1Q2TAL8 776 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 CATSPERGQ6ZRH7 1159 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 TRIM67Q6ZTA4 783 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 HEATR3Q7Z4Q2 680 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 SYT2Q8N9I0 419 aaPredicted RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 LSM14AQ8ND56 463 aaKnown RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 GDAP1Q8TB36 358 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 DYDC2Q96IM9 177 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 NHEJ1Q9H9Q4 299 aaPredicted RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 INTS9Q9NV88 658 aaKnown RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 PRELID1Q9Y255 219 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 FADS3Q9Y5Q0 445 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L15C9J2P7 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L13C9JLJ4 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L11C9JVI0 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L18D6R9N7 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L22D6RA61 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L17D6RBQ6 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L19D6RCP7 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L20D6RJB6 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 MMP1P03956 469 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 HOXA7P31268 230 aaPredicted RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 ERVK-9P63128 1117 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 USP17L24Q0WX57 530 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 MOGSQ13724 837 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 SAFBQ15424 915 aaKnown RBP eCLIP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 TREML2Q5T2D2 321 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 SPRYD7Q5W111 196 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 TYW1BQ6NUM6 668 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 FASTKD5Q7L8L6 764 aaKnown RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 KRI1Q8N9T8 703 aaKnown RBP13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 PHF20Q9BVI0 1012 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 SYNCQ9H7C4 482 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 ATAD3AQ9NVI7 634 aa13.38□□□□□ -0.27
SLC39A9-207ENST00000555840 NPHP3-ACAD11A0A0J9YXS1 232 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 SMIM23A6NLE4 172 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 BTBD19C9JJ37 291 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 POLR2DO15514 142 aaKnown RBP13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 PPP1R11O60927 126 aaPredicted RBP13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 OXSR1O95747 527 aaPredicted RBP13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 FDX1P10109 184 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 ENDOUP21128 410 aaKnown RBP13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 MTMR3Q13615 1198 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 KIF22Q14807 665 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 CCDC6Q16204 474 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 WDR72Q3MJ13 1102 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 PDCD4Q53EL6 469 aaKnown RBP13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 C6orf183Q5T699 404 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 KLHL35Q6PF15 583 aa13.37□□□□□ -0.27
SLC39A9-207ENST00000555840 GADL1Q6ZQY3 521 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms