RNA–Protein interactions for RNA: ENST00000555648.1

SNX6-205, Transcript of sorting nexin 6, humanhuman

TSL 3

Gene SNX6, Length 467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-205ENST00000555648 TAS1R3Q7RTX0 852 aa16.88■□□□□ 0.29
SNX6-205ENST00000555648 GPBP1Q86WP2 473 aa16.88■□□□□ 0.29
SNX6-205ENST00000555648 SNX27Q96L92 541 aa16.88■□□□□ 0.29
SNX6-205ENST00000555648 SMOC2Q9H3U7 446 aa16.88■□□□□ 0.29
SNX6-205ENST00000555648 ZHX3Q9H4I2 956 aa16.88■□□□□ 0.29
SNX6-205ENST00000555648 GOLGA2P5Q9HBQ8 144 aa16.88■□□□□ 0.29
SNX6-205ENST00000555648 FBXW11Q9UKB1 542 aa16.88■□□□□ 0.29
SNX6-205ENST00000555648 TECTAO75443 2155 aa16.88■□□□□ 0.29
SNX6-205ENST00000555648 PODXLO00592 558 aa16.87■□□□□ 0.29
SNX6-205ENST00000555648 PDGFBP01127 241 aaPredicted RBP16.87■□□□□ 0.29
SNX6-205ENST00000555648 HNRNPA1P09651 372 aaKnown RBP eCLIP16.87■□□□□ 0.29
SNX6-205ENST00000555648 FGFR3P22607 806 aa16.87■□□□□ 0.29
SNX6-205ENST00000555648 FSHRP23945 695 aa16.87■□□□□ 0.29
SNX6-205ENST00000555648 RPL9P32969 192 aaKnown RBP16.87■□□□□ 0.29
SNX6-205ENST00000555648 OR1D2P34982 312 aa16.87■□□□□ 0.29
SNX6-205ENST00000555648 LONP1P36776 959 aaKnown RBP16.87■□□□□ 0.29
SNX6-205ENST00000555648 CACNB1Q02641 598 aaPredicted RBP16.87■□□□□ 0.29
SNX6-205ENST00000555648 ZPBP2Q6X784 338 aa16.87■□□□□ 0.29
SNX6-205ENST00000555648 TMEM161BQ8NDZ6 487 aa16.87■□□□□ 0.29
SNX6-205ENST00000555648 NXPE3Q969Y0 559 aa16.87■□□□□ 0.29
SNX6-205ENST00000555648 ZNF707Q96C28 371 aaPredicted RBP16.87■□□□□ 0.29
SNX6-205ENST00000555648 ODF2LQ9ULJ1 636 aa16.87■□□□□ 0.29
SNX6-205ENST00000555648 NPHP3-ACAD11A0A0J9YXS1 232 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 TBCAO75347 108 aaKnown RBP16.86■□□□□ 0.29
SNX6-205ENST00000555648 MAPTP10636 758 aaKnown RBP16.86■□□□□ 0.29
SNX6-205ENST00000555648 SCP2P22307 547 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 PROZP22891 400 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 ELF1P32519 619 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 BRCC3P46736 316 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 LIG4P49917 911 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 NUBP1P53384 320 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 RAB33AQ14088 237 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 SF3A1Q15459 793 aaKnown RBP16.86■□□□□ 0.29
SNX6-205ENST00000555648 MYCT1Q8N699 235 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 PRSS33Q8NF86 280 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 FLCNQ8NFG4 579 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 SLC7A14Q8TBB6 771 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 ZBTB45Q96K62 511 aaPredicted RBP16.86■□□□□ 0.29
SNX6-205ENST00000555648 MYADMQ96S97 322 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 EPS15L1Q9UBC2 864 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 MTRRQ9UBK8 725 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 DUSP12Q9UNI6 340 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 BACE2Q9Y5Z0 518 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 CDY1Q9Y6F8 540 aa16.86■□□□□ 0.29
SNX6-205ENST00000555648 H7C4K7 107 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 I3L4J1 428 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 K7ENM7 598 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 STK25O00506 426 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 CCL16O15467 120 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 KCNE1P15382 129 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 TKTP29401 623 aaKnown RBP16.85■□□□□ 0.29
SNX6-205ENST00000555648 HOXA9P31269 272 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 MRE11P49959 708 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 KYAT1Q16773 422 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 UVSSAQ2YD98 709 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 XKR4Q5GH76 650 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 AXDND1Q5T1B0 1012 aaPredicted RBP16.85■□□□□ 0.29
SNX6-205ENST00000555648 ASTLQ6HA08 431 aaPredicted RBP16.85■□□□□ 0.29
SNX6-205ENST00000555648 ALKAL1Q6UXT8 129 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 HAUS6Q7Z4H7 955 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 GRASPQ7Z6J2 395 aaPredicted RBP16.85■□□□□ 0.29
SNX6-205ENST00000555648 REEP2Q9BRK0 252 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 PARVGQ9HBI0 331 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 CNTN3Q9P232 1028 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 CCDC39Q9UFE4 941 aa16.85■□□□□ 0.29
SNX6-205ENST00000555648 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.85■□□□□ 0.29
SNX6-205ENST00000555648 ZFP37Q9Y6Q3 630 aaPredicted RBP16.85■□□□□ 0.29
SNX6-205ENST00000555648 HNRNPDLO14979 420 aaKnown RBP16.84■□□□□ 0.29
SNX6-205ENST00000555648 SYN3O14994 580 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 ADAM12O43184 909 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 N4BP1O75113 896 aaKnown RBP16.84■□□□□ 0.29
SNX6-205ENST00000555648 CLTAP09496 248 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 LAMP2P13473 410 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 PLCG1P19174 1290 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 MARCKSP29966 332 aaPredicted RBP16.84■□□□□ 0.29
SNX6-205ENST00000555648 ABCD1P33897 745 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 MCM4P33991 863 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 TXLNAP40222 546 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 ARPP19P56211 112 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
SNX6-205ENST00000555648 MCL1Q07820 350 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 CUL4AQ13619 759 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 KARSQ15046 597 aaKnown RBP16.84■□□□□ 0.29
SNX6-205ENST00000555648 RTL10Q7L3V2 364 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 ATOH1Q92858 354 aaPredicted RBP16.84■□□□□ 0.29
SNX6-205ENST00000555648 ZMAT2Q96NC0 199 aaKnown RBP16.84■□□□□ 0.29
SNX6-205ENST00000555648 PLEKHA5Q9HAU0 1116 aa16.84■□□□□ 0.29
SNX6-205ENST00000555648 TDRD15B5MCY1 1934 aaKnown RBP16.84■□□□□ 0.29
SNX6-205ENST00000555648 ABLIM1O14639 778 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 PRRG1O14668 218 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 XPOTO43592 962 aaKnown RBP16.83■□□□□ 0.28
SNX6-205ENST00000555648 TRAK2O60296 914 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 PAPLNO95428 1278 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 CLCN5P51795 746 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 NCKAP1LP55160 1127 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 PPP2R3AQ06190 1150 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 MCM6Q14566 821 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 SEZ6Q53EL9 994 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 ARSHQ5FYA8 562 aa16.83■□□□□ 0.28
SNX6-205ENST00000555648 VARS2Q5ST30 1063 aaKnown RBP16.83■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms