RNA–Protein interactions for RNA: ENST00000555609.5

TUBB3-209, Transcript of tubulin beta 3 class III, humanhuman

TSL 3

Gene TUBB3, Length 1,855 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-209ENST00000555609 CLDN3O15551 220 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 ATMINO43313 823 aaPredicted RBP17.27■□□□□ 0.35
TUBB3-209ENST00000555609 TTC4O95801 387 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 MKRN3Q13064 507 aaKnown RBP17.27■□□□□ 0.35
TUBB3-209ENST00000555609 SPP2Q13103 211 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 SV2AQ7L0J3 742 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 EXOC3L1Q86VI1 746 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 RTKN2Q8IZC4 609 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 GBP7Q8N8V2 638 aaPredicted RBP17.27■□□□□ 0.35
TUBB3-209ENST00000555609 ZSWIM2Q8NEG5 633 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 MCPH1Q8NEM0 835 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 TAS1R2Q8TE23 839 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 EPS8L3Q8TE67 593 aaKnown RBP17.27■□□□□ 0.35
TUBB3-209ENST00000555609 CCDC127Q96BQ5 260 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 PRMT1Q99873 361 aaKnown RBP17.27■□□□□ 0.35
TUBB3-209ENST00000555609 MOV10L1Q9BXT6 1211 aaKnown RBP17.27■□□□□ 0.35
TUBB3-209ENST00000555609 KIAA1683Q9H0B3 1180 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 PGAP2Q9UHJ9 254 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 ANAPC7Q9UJX3 599 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 SLC12A4Q9UP95 1085 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 PTPN22Q9Y2R2 807 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 ACTL7BQ9Y614 415 aa17.27■□□□□ 0.35
TUBB3-209ENST00000555609 PSTPIP1O43586 416 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 POTEJP0CG39 1038 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 SLC8A1P32418 973 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 CLDN10P78369 228 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 UGCGQ16739 394 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 GPRASP2Q96D09 838 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 BTBD6Q96KE9 485 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 DCLK3Q9C098 648 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 GPRC5CQ9NQ84 441 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 C1orf112Q9NSG2 853 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 ZNF219Q9P2Y4 722 aaPredicted RBP17.26■□□□□ 0.35
TUBB3-209ENST00000555609 ASIC3Q9UHC3 531 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 PCDHA10Q9Y5I2 948 aa17.26■□□□□ 0.35
TUBB3-209ENST00000555609 MGRN1O60291 552 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 VIMP08670 466 aaKnown RBP17.25■□□□□ 0.35
TUBB3-209ENST00000555609 IVDP26440 423 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 KCNJ1P48048 391 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 CCNG2Q16589 344 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 LIN9Q5TKA1 542 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 C15orf39Q6ZRI6 1047 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 LARGE2Q8N3Y3 721 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 AGBL3Q8NEM8 1001 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 CCHCR1Q8TD31 782 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 POMGNT1Q8WZA1 660 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 ATP6V0A1Q93050 837 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 TAAR1Q96RJ0 339 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 NCAPGQ9BPX3 1015 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 CCDC77Q9BR77 488 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 PDCD2LQ9BRP1 358 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 ZNF341Q9BYN7 854 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 MAF1Q9H063 256 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 AAASQ9NRG9 546 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 LGALS13Q9UHV8 139 aa17.25■□□□□ 0.35
TUBB3-209ENST00000555609 NDC80O14777 642 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 PROSCO94903 275 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 CYP1A1P04798 512 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 ATF2P15336 505 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 LMNB2Q03252 620 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 PREPLQ4J6C6 727 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 WDR44Q5JSH3 913 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 WLSQ5T9L3 541 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 TRPM8Q7Z2W7 1104 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 NLRX1Q86UT6 975 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 RIBC1Q8N443 379 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 CCDC89Q8N998 374 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 ARHGEF2Q92974 986 aaKnown RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 SAAL1Q96ER3 474 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 VEZTQ9HBM0 779 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 MRPL47Q9HD33 250 aaKnown RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 PXMP2Q9NR77 195 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 SMIM23A6NLE4 172 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 O00370 1275 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 TP73O15350 636 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 EXTL3O43909 919 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 SNX3O60493 162 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 ZBED4O75132 1171 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 DGAT1O75907 488 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 CCNE2O96020 404 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 OAS1P00973 400 aaKnown RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 DLATP10515 647 aaKnown RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 KRT5P13647 590 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 CHRNA5P30532 468 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 CETN2P41208 172 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 RPS6P62753 249 aaKnown RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 RIPK1Q13546 671 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 SAMD1Q6SPF0 538 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 SLC16A10Q8TF71 515 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 ZKSCAN4Q969J2 545 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 DDX27Q96GQ7 796 aaKnown RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 ELAC2Q9BQ52 826 aaKnown RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 SGIP1Q9BQI5 828 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 JPH2Q9BR39 696 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 GLIS2Q9BZE0 524 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 HAUS2Q9NVX0 235 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 GEMIN8Q9NWZ8 242 aaKnown RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 CHORDC1Q9UHD1 332 aaPredicted RBP17.24■□□□□ 0.35
TUBB3-209ENST00000555609 ANAPC5Q9UJX4 755 aa17.24■□□□□ 0.35
TUBB3-209ENST00000555609 USP15Q9Y4E8 981 aaPredicted RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 80.8 ms