RNA–Protein interactions for RNA: ENST00000555405.5

NEK9-205, Transcript of NIMA related kinase 9, humanhuman

TSL 1 (best)

Gene NEK9, Length 3,357 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-205ENST00000555405 ITGA4P13612 1032 aa11□□□□□ -0.65
NEK9-205ENST00000555405 DRAP1Q14919 205 aaPredicted RBP11□□□□□ -0.65
NEK9-205ENST00000555405 TMEM132DQ14C87 1099 aa11□□□□□ -0.65
NEK9-205ENST00000555405 LRRC8DQ7L1W4 858 aa11□□□□□ -0.65
NEK9-205ENST00000555405 EHBP1Q8NDI1 1231 aa11□□□□□ -0.65
NEK9-205ENST00000555405 HASPINQ8TF76 798 aa11□□□□□ -0.65
NEK9-205ENST00000555405 MFSD14AQ96MC6 490 aa11□□□□□ -0.65
NEK9-205ENST00000555405 NT5C1BQ96P26 610 aa11□□□□□ -0.65
NEK9-205ENST00000555405 ARID3AQ99856 593 aa11□□□□□ -0.65
NEK9-205ENST00000555405 AJAP1Q9UKB5 411 aaPredicted RBP11□□□□□ -0.65
NEK9-205ENST00000555405 PIGRP01833 764 aa11□□□□□ -0.65
NEK9-205ENST00000555405 MLH1P40692 756 aa11□□□□□ -0.65
NEK9-205ENST00000555405 SNRPFP62306 86 aaKnown RBP11□□□□□ -0.65
NEK9-205ENST00000555405 CYP27A1Q02318 531 aa11□□□□□ -0.65
NEK9-205ENST00000555405 BFSP2Q13515 415 aa11□□□□□ -0.65
NEK9-205ENST00000555405 MYBPC2Q14324 1141 aa11□□□□□ -0.65
NEK9-205ENST00000555405 PSMD6Q15008 389 aa11□□□□□ -0.65
NEK9-205ENST00000555405 WDR72Q3MJ13 1102 aa11□□□□□ -0.65
NEK9-205ENST00000555405 KLHDC7AQ5VTJ3 777 aa11□□□□□ -0.65
NEK9-205ENST00000555405 IQCEQ6IPM2 695 aa11□□□□□ -0.65
NEK9-205ENST00000555405 APBB1IPQ7Z5R6 666 aaPredicted RBP11□□□□□ -0.65
NEK9-205ENST00000555405 ZNF592Q92610 1267 aa11□□□□□ -0.65
NEK9-205ENST00000555405 TMEM8AQ9HCN3 771 aa11□□□□□ -0.65
NEK9-205ENST00000555405 SPTLC3Q9NUV7 552 aa11□□□□□ -0.65
NEK9-205ENST00000555405 MYO7AQ13402 2215 aa11□□□□□ -0.65
NEK9-205ENST00000555405 A0A1W2PQC6 194 aa11□□□□□ -0.65
NEK9-205ENST00000555405 MGEA5O60502 916 aa11□□□□□ -0.65
NEK9-205ENST00000555405 RAG1P15918 1043 aa11□□□□□ -0.65
NEK9-205ENST00000555405 SYN1P17600 705 aa11□□□□□ -0.65
NEK9-205ENST00000555405 POLR2BP30876 1174 aaKnown RBP11□□□□□ -0.65
NEK9-205ENST00000555405 PBX1P40424 430 aa11□□□□□ -0.65
NEK9-205ENST00000555405 SFMBT2Q5VUG0 894 aa11□□□□□ -0.65
NEK9-205ENST00000555405 PHLDB3Q6NSJ2 640 aa11□□□□□ -0.65
NEK9-205ENST00000555405 NECAB2Q7Z6G3 386 aa11□□□□□ -0.65
NEK9-205ENST00000555405 NUP58Q9BVL2 599 aa11□□□□□ -0.65
NEK9-205ENST00000555405 PTPRHQ9HD43 1115 aa11□□□□□ -0.65
NEK9-205ENST00000555405 C1orf112Q9NSG2 853 aa11□□□□□ -0.65
NEK9-205ENST00000555405 ABHD10Q9NUJ1 306 aa11□□□□□ -0.65
NEK9-205ENST00000555405 FAM105AQ9NUU6 356 aa11□□□□□ -0.65
NEK9-205ENST00000555405 TFR2Q9UP52 801 aa11□□□□□ -0.65
NEK9-205ENST00000555405 ACRP10323 421 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 POU5F1BQ06416 359 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 KLHL30Q0D2K2 578 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 E4F1Q66K89 784 aaPredicted RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 TMCO2Q7Z6W1 182 aaPredicted RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 CCDC42Q96M95 316 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 CGRRF1Q99675 332 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 C11orf49Q9H6J7 331 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 MROH7Q68CQ1 1323 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 CASTOR2A6NHX0 329 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 STX10O60499 249 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 SELPP16109 830 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 RAP1GAPP47736 663 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 SCNN1GP51170 649 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 CDH8P55286 799 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 MARSP56192 900 aaKnown RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 PKN2Q16513 984 aaKnown RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 FAM126BQ8IXS8 530 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 ZC3H3Q8IXZ2 948 aaKnown RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 TMC2Q8TDI7 906 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 FBXL18Q96ME1 805 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 STYXL1Q9Y6J8 313 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 SCN10AQ9Y5Y9 1956 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 CCDC85CA6NKD9 419 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 ZBBXA8MT70 800 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 ESPNB1AK53 854 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 FOXN3O00409 490 aaPredicted RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 ABLIM1O14639 778 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 N4BP1O75113 896 aaKnown RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 NOL4O94818 638 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 IPO7O95373 1038 aaKnown RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 GJA8P48165 433 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 NAP1L1P55209 391 aaKnown RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 ZBED6P86452 979 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 RNASELQ05823 741 aaKnown RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 MBTPS1Q14703 1052 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 ASIC2Q16515 512 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 LRRC26Q2I0M4 334 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 ZNF699Q32M78 642 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 ACRBPQ8NEB7 543 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 ZMAT2Q96NC0 199 aaKnown RBP10.99□□□□□ -0.65
NEK9-205ENST00000555405 NFKBIZQ9BYH8 718 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 TUBGCP4Q9UGJ1 667 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 CAPN11Q9UMQ6 739 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 POLIQ9UNA4 740 aa10.99□□□□□ -0.65
NEK9-205ENST00000555405 PPEF2O14830 753 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 FGFR1P11362 822 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 NFIL3Q16649 462 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 FAM187BQ17R55 369 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 DCAF4L1Q3SXM0 396 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 PHLDB2Q86SQ0 1253 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 TET1Q8NFU7 2136 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 LZTFL1Q9NQ48 299 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 DPP3Q9NY33 737 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 APEX2Q9UBZ4 518 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 LRFN2Q9ULH4 789 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 PLAGL2Q9UPG8 496 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 PCDHB4Q9Y5E5 795 aa10.98□□□□□ -0.65
NEK9-205ENST00000555405 KIAA0391O15091 583 aaKnown RBP10.98□□□□□ -0.65
NEK9-205ENST00000555405 CD19P15391 556 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms