RNA–Protein interactions for RNA: ENST00000554570.1

KTN1-216, Transcript of kinectin 1, humanhuman

TSL 5

Gene KTN1, Length 521 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-216ENST00000554570 MIGA2Q7L4E1 593 aa5.86□□□□□ -1.47
KTN1-216ENST00000554570 LDLRAD3Q86YD5 345 aa5.86□□□□□ -1.47
KTN1-216ENST00000554570 CCHCR1Q8TD31 782 aa5.86□□□□□ -1.47
KTN1-216ENST00000554570 HDAC10Q969S8 669 aa5.86□□□□□ -1.47
KTN1-216ENST00000554570 NOP58Q9Y2X3 529 aaKnown RBP5.86□□□□□ -1.47
KTN1-216ENST00000554570 WDR33Q9C0J8 1336 aaKnown RBP5.85□□□□□ -1.47
KTN1-216ENST00000554570 TMEM191CA6NGB0 347 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 XPOTO43592 962 aaKnown RBP5.85□□□□□ -1.47
KTN1-216ENST00000554570 HLA-DOAP06340 250 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 ADKP55263 362 aaKnown RBP5.85□□□□□ -1.47
KTN1-216ENST00000554570 CTXN1P60606 82 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 RAP2BP61225 183 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 CDC42EP1Q00587 391 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 PTPAQ15257 358 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 ARMC6Q6NXE6 501 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 ZNF529Q6P280 563 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 ARHGEF19Q8IW93 802 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 RHOT1Q8IXI2 618 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 ZGPATQ8N5A5 531 aaKnown RBP5.85□□□□□ -1.47
KTN1-216ENST00000554570 PROKR1Q8TCW9 393 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 COA7Q96BR5 231 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 MLST8Q9BVC4 326 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 HOMER2Q9NSB8 354 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 ATP11BQ9Y2G3 1177 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 USP15Q9Y4E8 981 aaPredicted RBP5.85□□□□□ -1.47
KTN1-216ENST00000554570 FPGT-TNNI3KV9GXZ4 949 aa5.85□□□□□ -1.47
KTN1-216ENST00000554570 CENPVL1A0A0U1RR11 272 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 ANKRD62A6NC57 917 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 HTRA2O43464 458 aaPredicted RBP5.84□□□□□ -1.47
KTN1-216ENST00000554570 CFIP05156 583 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 ALAS1P13196 640 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 IBSPP21815 317 aaPredicted RBP5.84□□□□□ -1.47
KTN1-216ENST00000554570 GCSHP23434 173 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 EDNRBP24530 442 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 TAP1Q03518 808 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 ATP2B3Q16720 1220 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 PTPN21Q16825 1174 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 EFCAB2Q5VUJ9 269 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 KCNV1Q6PIU1 500 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 MED25Q71SY5 747 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 MRGPRGQ86SM5 289 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 PNMA8AQ86V59 439 aaPredicted RBP5.84□□□□□ -1.47
KTN1-216ENST00000554570 RPUSD2Q8IZ73 545 aaKnown RBP5.84□□□□□ -1.47
KTN1-216ENST00000554570 CHFRQ96EP1 664 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 GPATCH3Q96I76 525 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 MYOCQ99972 504 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 TEX101Q9BY14 249 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 REXO4Q9GZR2 422 aaKnown RBP5.84□□□□□ -1.47
KTN1-216ENST00000554570 TDP1Q9NUW8 608 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 KLHL11Q9NVR0 708 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 LIMCH1Q9UPQ0 1083 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 COL4A3Q01955 1670 aa5.84□□□□□ -1.47
KTN1-216ENST00000554570 FOXN1O15353 648 aa5.83□□□□□ -1.48
KTN1-216ENST00000554570 TARDBPQ13148 414 aaKnown RBP eCLIP5.83□□□□□ -1.48
KTN1-216ENST00000554570 PPP4R3AQ6IN85 833 aa5.83□□□□□ -1.48
KTN1-216ENST00000554570 PCSK4Q6UW60 755 aa5.83□□□□□ -1.48
KTN1-216ENST00000554570 OR56A1Q8NGH5 318 aa5.83□□□□□ -1.48
KTN1-216ENST00000554570 FBXO34Q9NWN3 711 aa5.83□□□□□ -1.48
KTN1-216ENST00000554570 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.83□□□□□ -1.48
KTN1-216ENST00000554570 NDUFA10O95299 355 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 DDX6P26196 483 aaKnown RBP eCLIP5.82□□□□□ -1.48
KTN1-216ENST00000554570 EXOSC10Q01780 885 aaKnown RBP5.82□□□□□ -1.48
KTN1-216ENST00000554570 KIF23Q02241 960 aaPredicted RBP5.82□□□□□ -1.48
KTN1-216ENST00000554570 RAB39AQ14964 217 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 ODF1Q14990 250 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 BRDTQ58F21 947 aaPredicted RBP5.82□□□□□ -1.48
KTN1-216ENST00000554570 TSHZ3Q63HK5 1081 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 LAIR1Q6GTX8 287 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 MAPKAPK5Q8IW41 473 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 FAM177A1Q8N128 213 aaPredicted RBP5.82□□□□□ -1.48
KTN1-216ENST00000554570 CPEB3Q8NE35 698 aaKnown RBP5.82□□□□□ -1.48
KTN1-216ENST00000554570 NLGN4YQ8NFZ3 816 aaPredicted RBP5.82□□□□□ -1.48
KTN1-216ENST00000554570 IFI44Q8TCB0 444 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 FUBP1Q96AE4 644 aaKnown RBP5.82□□□□□ -1.48
KTN1-216ENST00000554570 MRGPRX4Q96LA9 322 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 CEP89Q96ST8 783 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 ADAM2Q99965 735 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 C11orf54Q9H0W9 315 aaPredicted RBP5.82□□□□□ -1.48
KTN1-216ENST00000554570 IKZF4Q9H2S9 585 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 SERHL2Q9H4I8 314 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 PCDHA13Q9Y5I0 950 aa5.82□□□□□ -1.48
KTN1-216ENST00000554570 A0A087X1B8 175 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 A0A1B0GTW7 788 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 CCDC154A6NI56 674 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 LPXNO60711 386 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 ZRANB2O95218 330 aaKnown RBP eCLIP5.81□□□□□ -1.48
KTN1-216ENST00000554570 RPLP2P05387 115 aaKnown RBP5.81□□□□□ -1.48
KTN1-216ENST00000554570 ELANEP08246 267 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 CKBP12277 381 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 CCND1P24385 295 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 RECQLP46063 649 aaPredicted RBP5.81□□□□□ -1.48
KTN1-216ENST00000554570 CREMQ03060 361 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 C3orf36Q3SXR2 165 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 UBE3BQ7Z3V4 1068 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 TMEM132CQ8N3T6 1108 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 FITM2Q8N6M3 262 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 DCBLD1Q8N8Z6 715 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 NUP133Q8WUM0 1156 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 PHACTR3Q96KR7 559 aa5.81□□□□□ -1.48
KTN1-216ENST00000554570 DMRTA2Q96SC8 542 aa5.81□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms