RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 AUTS2Q8WXX7 1259 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 SNX27Q96L92 541 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 UROC1Q96N76 676 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 KLHL5Q96PQ7 755 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 POP1Q99575 1024 aaKnown RBP8.24□□□□□ -1.09
LINC00640-201ENST00000554409 PAAF1Q9BRP4 392 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 GPR62Q9BZJ7 368 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 CXCL16Q9H2A7 254 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 ST6GALNAC4Q9H4F1 302 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 RXFP1Q9HBX9 757 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 CD320Q9NPF0 282 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 CNTN3Q9P232 1028 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 SEL1LQ9UBV2 794 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 TBX20Q9UMR3 447 aa8.24□□□□□ -1.09
LINC00640-201ENST00000554409 MTCL1Q9Y4B5 1905 aaKnown RBP8.24□□□□□ -1.09
LINC00640-201ENST00000554409 SF3B1O75533 1304 aaKnown RBP eCLIP8.24□□□□□ -1.09
LINC00640-201ENST00000554409 ANK1P16157 1881 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 VCANP13611 3396 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 C2orf16Q68DN1 1984 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 A0A087X0B3 334 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 SMIM28A0A1B0GU29 152 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CASTOR2A6NHX0 329 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 MYMKA6NI61 221 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 LOC730098B7Z3J9 87 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CLDN3O15551 220 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CUTAO60888 179 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 KIF4AO95239 1232 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 KRT18P05783 430 aaKnown RBP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CNPP09543 421 aaKnown RBP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 KCNE1P15382 129 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 EPCAMP16422 314 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 KLRC2P26717 231 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CA8P35219 290 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CLCN4P51793 760 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 ELAVL2Q12926 359 aaKnown RBP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CBX2Q14781 532 aaPredicted RBP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 KYAT1Q16773 422 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 USP41Q3LFD5 358 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 SV2BQ7L1I2 683 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 TAS1R1Q7RTX1 841 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 ZBTB33Q86T24 672 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 MAP4K3Q8IVH8 894 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 SPNS2Q8IVW8 549 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 TMEM87AQ8NBN3 555 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 HVCN1Q96D96 273 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 DNAJC19Q96DA6 116 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 ZBTB45Q96K62 511 aaPredicted RBP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 ACAP3Q96P50 834 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 TCHPQ9BT92 498 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 PHF7Q9BWX1 381 aaPredicted RBP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CUEDC2Q9H467 287 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 SLC38A7Q9NVC3 462 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 FNIP2Q9P278 1114 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 ANKFY1Q9P2R3 1169 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 TFIP11Q9UBB9 837 aaKnown RBP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 CACNG4Q9UBN1 327 aa8.23□□□□□ -1.09
LINC00640-201ENST00000554409 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.23□□□□□ -1.09
LINC00640-201ENST00000554409 NCOR1O75376 2440 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 FRMD3A2A2Y4 597 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 PI4K2BG5E9Z4 385 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 HNRNPDLO14979 420 aaKnown RBP8.22□□□□□ -1.09
LINC00640-201ENST00000554409 TEX28O15482 410 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 MEFVO15553 781 aaPredicted RBP8.22□□□□□ -1.09
LINC00640-201ENST00000554409 FAM189A1O60320 539 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 TADA2AO75478 443 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 PAPLNO95428 1278 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 ADH1AP07327 375 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 GAP43P17677 238 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 NMT1P30419 496 aaKnown RBP8.22□□□□□ -1.09
LINC00640-201ENST00000554409 SSTR3P32745 418 aaPredicted RBP8.22□□□□□ -1.09
LINC00640-201ENST00000554409 STAT6P42226 847 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 LIG4P49917 911 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 OSTNP61366 133 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 SOX4Q06945 474 aaPredicted RBP8.22□□□□□ -1.09
LINC00640-201ENST00000554409 PKP1Q13835 747 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 UPP1Q16831 310 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 SLC10A6Q3KNW5 377 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 GLRA4Q5JXX5 417 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 KIAA1841Q6NSI8 718 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 PDXDC1Q6P996 788 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 DCLRE1AQ6PJP8 1040 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 DYMQ7RTS9 669 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 SFR1Q86XK3 245 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 KCNG4Q8TDN1 519 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 HDAC7Q8WUI4 952 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 PIK3R5Q8WYR1 880 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 BICD1Q96G01 975 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 FBXL18Q96ME1 805 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 ZMAT2Q96NC0 199 aaKnown RBP8.22□□□□□ -1.09
LINC00640-201ENST00000554409 NECTIN4Q96NY8 510 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 TSPAN18Q96SJ8 248 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 TTPALQ9BTX7 342 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 STRA6Q9BX79 667 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 C1QTNF1Q9BXJ1 281 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 RHOBTB2Q9BYZ6 727 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 ADAM33Q9BZ11 813 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 HAPLN2Q9GZV7 340 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 ADAM7Q9H2U9 754 aa8.22□□□□□ -1.09
LINC00640-201ENST00000554409 ZHX3Q9H4I2 956 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms