RNA–Protein interactions for RNA: ENST00000554353.1

MTHFD1-206, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2

Gene MTHFD1, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-206ENST00000554353 PCDHGA6Q9Y5G7 932 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PCDHGA3Q9Y5H0 932 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 PCDHGA2Q9Y5H1 932 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 GPR45Q9Y5Y3 372 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 IL16Q14005 1332 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 DOT1LQ8TEK3 1739 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 DLG5Q8TDM6 1919 aa6.19□□□□□ -1.42
MTHFD1-206ENST00000554353 E2F8A0AVK6 867 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 DDX3XO00571 662 aaKnown RBP eCLIP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 KNG1P01042 644 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 KRT18P05783 430 aaKnown RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 CELA3BP08861 270 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 MED14OSP0DP75 135 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 MTHFD2P13995 350 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 ZSCAN20P17040 1043 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 HOXC9P31274 260 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 AMPHP49418 695 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 MRPS9P82933 396 aaKnown RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 HDAC1Q13547 482 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 DGKDQ16760 1214 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 ZNF827Q17R98 1081 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 GRAMD4Q6IC98 578 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 CHPFQ8IZ52 775 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 GAB3Q8WWW8 586 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 JPH3Q8WXH2 748 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 AUTS2Q8WXX7 1259 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 HIST1H2AHQ96KK5 128 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 HIST1H2AJQ99878 128 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 RTFDC1Q9BY42 306 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 PITHD1Q9GZP4 211 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 L2HGDHQ9H9P8 463 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 ARNT2Q9HBZ2 717 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 SPATA6Q9NWH7 488 aaPredicted RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 POLKQ9UBT6 870 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 PRSS50Q9UI38 385 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 TMPRSS11EQ9UL52 423 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 NOB1Q9ULX3 412 aaKnown RBP6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 SYNPO2Q9UMS6 1093 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 PCDHB6Q9Y5E3 794 aa6.18□□□□□ -1.42
MTHFD1-206ENST00000554353 COL24A1Q17RW2 1714 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 A0A0A6YYJ9 748 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 RFXAPO00287 272 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 LDHAP00338 332 aaKnown RBP6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 CHGBP05060 677 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 COL6A1P12109 1028 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 AGXTP21549 392 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 BDNFP23560 247 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 MTNR1BP49286 362 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 KCNQ1P51787 676 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 ANTXR2P58335 489 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 LMOD3Q0VAK6 560 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 SPIDRQ14159 915 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 MYBPC2Q14324 1141 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 RRS1Q15050 365 aaKnown RBP6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 KCNK18Q7Z418 384 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 LYSMD2Q8IV50 215 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 ADGRG2Q8IZP9 1017 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 PPM1NQ8N819 430 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 CDYL2Q8N8U2 506 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 OR14C36Q8NHC7 312 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 ZCCHC14Q8WYQ9 949 aaKnown RBP6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 JADE3Q92613 823 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 DYDC2Q96IM9 177 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 TEKT5Q96M29 485 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 CDH19Q9H159 772 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 ITGB4P16144 1822 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 MAP3K19Q56UN5 1328 aa6.17□□□□□ -1.42
MTHFD1-206ENST00000554353 TAF1LQ8IZX4 1826 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 A0A0G2JNJ9 132 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 ZNF500O60304 480 aaPredicted RBP6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 CUTAO60888 179 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 ABLIM3O94929 683 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 IL33O95760 270 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 KRT1P04264 644 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 XPAP23025 273 aaPredicted RBP6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 RPL13P26373 211 aaKnown RBP6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 EXOSC9Q06265 439 aaKnown RBP6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 MUM1Q2TAK8 710 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 ZNF385BQ569K4 471 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 PRR31Q5SQ13 230 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 LCE4AQ5TA78 99 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 ZNF280DQ6N043 979 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 OGFOD2Q6N063 350 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 PPP4R4Q6NUP7 873 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 GAREM2Q75VX8 874 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 BMP8AQ7Z5Y6 402 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 SAPCD2Q86UD0 394 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 MYO1HQ8N1T3 1032 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 CPA6Q8N4T0 437 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 NUDT10Q8NFP7 164 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 RSAD2Q8WXG1 361 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 FRAT1Q92837 279 aaPredicted RBP6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 IL17RAQ96F46 866 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 NUDT11Q96G61 164 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 RHOBTB2Q9BYZ6 727 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 IFT122Q9HBG6 1241 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 TFCP2L1Q9NZI6 479 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 NTMQ9P121 344 aa6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 SAE1Q9UBE0 346 aaPredicted RBP6.16□□□□□ -1.42
MTHFD1-206ENST00000554353 Q9UFV3 132 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms