RNA–Protein interactions for RNA: ENST00000554028.3

TMEM55B-205, humanhuman

TSL 2

Gene TMEM55B, Length 1,118 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-205ENST00000554028 C4BPAP04003 597 aaKnown RBP11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 RFX1P22670 979 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 PON1P27169 355 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 RFC2P35250 354 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 PIK3CAP42336 1068 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 CCL23P55773 120 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 KCNMA1Q12791 1236 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 TBX2Q13207 712 aaPredicted RBP11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 TMEM132DQ14C87 1099 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 PTPN21Q16825 1174 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 LRRC26Q2I0M4 334 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 SLC10A6Q3KNW5 377 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 ZACNQ401N2 412 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 C1orf220Q5T0J3 134 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 TRAF7Q6Q0C0 670 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 TMEM192Q8IY95 271 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 BEST2Q8NFU1 509 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 PLEKHO2Q8TD55 490 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 KIF12Q96FN5 646 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 SPAG5Q96R06 1193 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 RPS6KC1Q96S38 1066 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 PPP1R12CQ9BZL4 782 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 INTS2Q9H0H0 1204 aaKnown RBP11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 RGS18Q9NS28 235 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 CAPN11Q9UMQ6 739 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 GIT1Q9Y2X7 761 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 COQ4Q9Y3A0 265 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 C2CD2Q9Y426 696 aa11.3□□□□□ -0.6
TMEM55B-205ENST00000554028 A0A1W2PQJ5 194 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 ZC3H11AO75152 810 aaKnown RBP eCLIP11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 RECQL4O94761 1208 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 EOMESO95936 686 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 RAG1P15918 1043 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 EN2P19622 333 aaPredicted RBP11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 SLC9A1P19634 815 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 AKAP5P24588 427 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 CASP14P31944 242 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 CYP2C18P33260 490 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 KRT9P35527 623 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 ZBED6P86452 979 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 DSC3Q14574 896 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 SGSM1Q2NKQ1 1148 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 EPC2Q52LR7 807 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 KLHDC7AQ5VTJ3 777 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 LMBRD2Q68DH5 695 aaPredicted RBP11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 JADE1Q6IE81 842 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 TRIM65Q6PJ69 517 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 SLC24A5Q71RS6 500 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 TRAPPC11Q7Z392 1133 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 MRPL10Q7Z7H8 261 aaKnown RBP11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 RNF169Q8NCN4 708 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 OR8K1Q8NGG5 319 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 ZNF516Q92618 1163 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 SNX27Q96L92 541 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 NT5C1BQ96P26 610 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 NXF3Q9H4D5 531 aaKnown RBP11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 PRDM5Q9NQX1 630 aaPredicted RBP11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 CEP72Q9P209 647 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 TBX21Q9UL17 535 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 HES2Q9Y543 173 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 FRMPD3Q5JV73 1810 aa11.29□□□□□ -0.6
TMEM55B-205ENST00000554028 SIP14410 1827 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 NBNO60934 754 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 MFAP3LO75121 409 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 HLA-DRAP01903 254 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 GYPCP04921 128 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 KRT19P08727 400 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 CCDC172P0C7W6 258 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 UCHL3P15374 230 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 IBSPP21815 317 aaPredicted RBP11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 KLK7P49862 253 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 MFAP3P55082 362 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 POLR2FP61218 127 aaKnown RBP11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 RBP5P82980 135 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 NCOA4Q13772 614 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 HS1BP3Q53T59 392 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 PLEKHG4Q58EX7 1191 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 TDRD10Q5VZ19 366 aaKnown RBP11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 ENOSF1Q7L5Y1 443 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 RPUSD2Q8IZ73 545 aaKnown RBP11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 TMEM199Q8N511 208 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 SMG8Q8ND04 991 aaKnown RBP11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 CCDC112Q8NEF3 446 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 DBF4BQ8NFT6 615 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 OR5B17Q8NGF7 314 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 TAS1R2Q8TE23 839 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 TAF4BQ92750 862 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 SCLYQ96I15 445 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 PANX2Q96RD6 677 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 MTMR12Q9C0I1 747 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 TMX1Q9H3N1 280 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 SLC38A7Q9NVC3 462 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 DPP3Q9NY33 737 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 KLK14Q9P0G3 267 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 CNTN3Q9P232 1028 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 APEX2Q9UBZ4 518 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 FBXL5Q9UKA1 691 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 ITGA11Q9UKX5 1188 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 LRFN2Q9ULH4 789 aa11.28□□□□□ -0.6
TMEM55B-205ENST00000554028 UBQLN1Q9UMX0 589 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms