RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 A0A1W2PPC1 479 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 TNPO2O14787 897 aaKnown RBP3.92□□□□□ -1.78
SLIRP-202ENST00000553981 SMAD7O15105 426 aaKnown RBP3.92□□□□□ -1.78
SLIRP-202ENST00000553981 KLHL18O94889 574 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 BTDP43251 543 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 HMGCS2P54868 508 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 UBXN2AP68543 259 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 CALD1Q05682 793 aaKnown RBP3.92□□□□□ -1.78
SLIRP-202ENST00000553981 SPP2Q13103 211 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 PICALMQ13492 652 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 RASGRF1Q13972 1273 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 KIF22Q14807 665 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 KIAA1755Q5JYT7 1200 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 SLC35F1Q5T1Q4 408 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 PHF19Q5T6S3 580 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 USP51Q70EK9 711 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 WDR63Q8IWG1 891 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 FAM178BQ8IXR5 827 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 TDHQ8IZJ6 230 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 Q8TCH9 128 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 TBC1D22AQ8WUA7 517 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 PARK7Q99497 189 aaKnown RBP3.92□□□□□ -1.78
SLIRP-202ENST00000553981 HTATIP2Q9BUP3 242 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 KRTAP9-8Q9BYQ0 159 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 TGIF2Q9GZN2 237 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 SIL1Q9H173 461 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 CDIP1Q9H305 208 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 SEMA4AQ9H3S1 761 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 ACTR10Q9NZ32 417 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 AGTPBP1Q9UPW5 1226 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 TESMINQ9Y4I5 508 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 NPFFR2Q9Y5X5 522 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 HS3ST3A1Q9Y663 406 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 RPTORQ8N122 1335 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 KIF16BQ96L93 1317 aa3.92□□□□□ -1.78
SLIRP-202ENST00000553981 GPR75-ASB3A0A0A6YYF3 556 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 TRIM43BA6NCK2 446 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MAFKO60675 156 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 ENTPD3O75355 529 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 CNOT4O95628 575 aaKnown RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 CAPNS1P04632 268 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 ATF4P18848 351 aaPredicted RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 HOXD10P28358 340 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 GUCY1A2P33402 732 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MCAMP43121 646 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MFAP1P55081 439 aaKnown RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MECOMQ03112 1051 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 KLF10Q13118 480 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 PUM3Q15397 648 aaKnown RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 SHHQ15465 462 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 FAM110CQ1W6H9 321 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 ANO1Q5XXA6 986 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 LARP1BQ659C4 914 aaKnown RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MRM1Q6IN84 353 aaKnown RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 NECAB2Q7Z6G3 386 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 DTX3Q8N9I9 347 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 CLEC4DQ8WXI8 215 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 LPIN2Q92539 896 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 TRIM43Q96BQ3 446 aaPredicted RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 NSUN4Q96CB9 384 aaKnown RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MEIS3Q99687 375 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 JAM3Q9BX67 310 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 SLITRK6Q9H5Y7 841 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 C11orf49Q9H6J7 331 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 DLL4Q9NR61 685 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 HMG20BQ9P0W2 317 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 BTBD7Q9P203 1132 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MORF4L1Q9UBU8 362 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 INPP5FQ9Y2H2 1132 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 SLC45A1Q9Y2W3 748 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MRVI1Q9Y6F6 885 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 MROH7-TTC4A0A0A0MT08 1334 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 SPTBN5Q9NRC6 3674 aaKnown RBP3.91□□□□□ -1.78
SLIRP-202ENST00000553981 FOCADQ5VW36 1801 aa3.91□□□□□ -1.78
SLIRP-202ENST00000553981 PNMA6EA0A0J9YXQ4 647 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 KRIT1O00522 736 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 SLC27A2O14975 620 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 CTNND1O60716 968 aaKnown RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 FRAT2O75474 233 aaPredicted RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 DDAH1O94760 285 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 HMGCRP04035 888 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 CHGBP05060 677 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 SLC5A1P13866 664 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 GRIA2P42262 883 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 DYNLL1P63167 89 aaKnown RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 GRIN1Q05586 938 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 TFCP2Q12800 502 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 SMAD2Q15796 467 aaKnown RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 ATP2B3Q16720 1220 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 CAVIN4Q5BKX8 364 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 PRAMEF19Q5SWL8 479 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 VASNQ6EMK4 673 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 FAM109BQ6ICB4 259 aaPredicted RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 Q6ZUG5 572 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 FASTKD5Q7L8L6 764 aaKnown RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 RALYLQ86SE5 291 aaKnown RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 VPS37DQ86XT2 251 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 TRIM48Q8IWZ4 208 aa3.9□□□□□ -1.79
SLIRP-202ENST00000553981 TRMT2AQ8IZ69 625 aaKnown RBP3.9□□□□□ -1.79
SLIRP-202ENST00000553981 PIP4K2CQ8TBX8 421 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms