RNA–Protein interactions for RNA: ENST00000553546.1

SDR39U1-205, Transcript of short chain dehydrogenase/reductase family 39U member 1, humanhuman

TSL 2

Gene SDR39U1, Length 648 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDR39U1-205ENST00000553546 TARS2Q9BW92 718 aaKnown RBP16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 CXCL16Q9H2A7 254 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 MFSD1Q9H3U5 465 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 KCNK12Q9HB15 430 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 LARSQ9P2J5 1176 aaKnown RBP16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 EPS15L1Q9UBC2 864 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 DUSP12Q9UNI6 340 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 VWA8A3KMH1 1905 aa16.58■□□□□ 0.24
SDR39U1-205ENST00000553546 SMIM28A0A1B0GU29 152 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 PLA2G4BP0C869 781 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 MYBP10242 640 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 FGFR3P22607 806 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 PROZP22891 400 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 HOXA9P31269 272 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 CLCNKBP51801 687 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 SLC12A3P55017 1021 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 UPP1Q16831 310 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 TMEM119Q4V9L6 283 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 ALKAL1Q6UXT8 129 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 CEP120Q8N960 986 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 CALML4Q96GE6 196 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 ACAP3Q96P50 834 aa16.57■□□□□ 0.24
SDR39U1-205ENST00000553546 SFI1A8K8P3 1242 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 TOM1L1O75674 476 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 PDGFBP01127 241 aaPredicted RBP16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 KCNE1P15382 129 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 SCP2P22307 547 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 UBA7P41226 1012 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 OSTNP61366 133 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 RAD51AP2Q09MP3 1159 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 PPM1LQ5SGD2 360 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 ZPBP2Q6X784 338 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 ANKS3Q6ZW76 656 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 RTL10Q7L3V2 364 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 ASCL5Q7RTU5 278 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 TMEM161BQ8NDZ6 487 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 SMOC2Q9H3U7 446 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 CNTN3Q9P232 1028 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 MTRRQ9UBK8 725 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 ODF2LQ9ULJ1 636 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 ZFP37Q9Y6Q3 630 aaPredicted RBP16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 DOCK8Q8NF50 2099 aa16.56■□□□□ 0.24
SDR39U1-205ENST00000553546 PTPRZ1P23471 2315 aaPredicted RBP16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 ABLIM1O14639 778 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 N4BP1O75113 896 aaKnown RBP16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 XYLBO75191 536 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 C8AP07357 584 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 POU2F2P09086 479 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 PDCP20941 246 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 RAB33AQ14088 237 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 NOLC1Q14978 699 aaKnown RBP eCLIP16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 UVSSAQ2YD98 709 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 ASTLQ6HA08 431 aaPredicted RBP16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 ATOH1Q92858 354 aaPredicted RBP16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 PLIN2Q99541 437 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 GOLGA2P5Q9HBQ8 144 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 ANKFY1Q9P2R3 1169 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 FBXL21Q9UKT6 434 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 BACE2Q9Y5Z0 518 aa16.55■□□□□ 0.24
SDR39U1-205ENST00000553546 FAM186AA6NE01 2351 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 H0Y858 1186 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 PODXLO00592 558 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 CLDN3O15551 220 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 MAPTP10636 758 aaKnown RBP16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 HARSP12081 509 aaKnown RBP16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 RPL9P32969 192 aaKnown RBP16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 OR1D2P34982 312 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 LONP1P36776 959 aaKnown RBP16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 CLCN5P51795 746 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 SOX4Q06945 474 aaPredicted RBP16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 GET4Q7L5D6 327 aaPredicted RBP16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 RASSF8Q8NHQ8 419 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 KCNN1Q92952 543 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 MYADMQ96S97 322 aa16.54■□□□□ 0.24
SDR39U1-205ENST00000553546 PDCD11Q14690 1871 aaKnown RBP16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 PROB1E7EW31 1015 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 SYN3O14994 580 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 GALR2O43603 387 aaPredicted RBP16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 LAMP2P13473 410 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 FSHRP23945 695 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 TKTP29401 623 aaKnown RBP16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 ABCD1P33897 745 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 MATR3P43243 847 aaKnown RBP eCLIP16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 NCKAP1LP55160 1127 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 MCL1Q07820 350 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 CUL4AQ13619 759 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 KYAT1Q16773 422 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 GPBP1Q86WP2 473 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 C3orf58Q8NDZ4 430 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 SLC7A14Q8TBB6 771 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 BICD1Q96G01 975 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 ZMAT2Q96NC0 199 aaKnown RBP16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 NUB1Q9Y5A7 615 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 CDY1Q9Y6F8 540 aa16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 RIF1Q5UIP0 2472 aaKnown RBP16.53■□□□□ 0.24
SDR39U1-205ENST00000553546 PRR23AA6NEV1 266 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 H7C4K7 107 aa16.52■□□□□ 0.24
SDR39U1-205ENST00000553546 ADAM12O43184 909 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 60.9 ms