RNA–Protein interactions for RNA: ENST00000553039.1

CKAP4-203, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 4

Gene CKAP4, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-203ENST00000553039 PABPC1LQ4VXU2 614 aaKnown RBP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 TANGO2Q6ICL3 276 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 MIS18BP1Q6P0N0 1132 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 C16orf46Q6P387 395 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 TAS1R1Q7RTX1 841 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 HOMER1Q86YM7 354 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 STAG2Q8N3U4 1231 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 CHCHD4Q8N4Q1 142 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 CNNM3Q8NE01 707 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 ITFG1Q8TB96 612 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 BCL7CQ8WUZ0 217 aaPredicted RBP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 PPP1R16BQ96T49 567 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 ZKSCAN3Q9BRR0 538 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 PLA2G2FQ9BZM2 168 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 LNPKQ9C0E8 428 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 SMOC1Q9H4F8 434 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 RIOX1Q9H6W3 641 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 UTP3Q9NQZ2 479 aaKnown RBP eCLIP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF302Q9NR11 478 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 HELLSQ9NRZ9 838 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 FAM105AQ9NUU6 356 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 PKD2L1Q9P0L9 805 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 TSR3Q9UJK0 312 aaKnown RBP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 PCDHB11Q9Y5F2 797 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 UBIAD1Q9Y5Z9 338 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 DSPP15924 2871 aaKnown RBP5.82□□□□□ -1.48
CKAP4-203ENST00000553039 ADAMTS20P59510 1910 aa5.82□□□□□ -1.48
CKAP4-203ENST00000553039 NFASCO94856 1347 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 CNTNAP2Q9UHC6 1331 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 ZZEF1O43149 2961 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 IGKV6D-21A0A0A0MT36 114 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 ANKRD62A6NC57 917 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 SPDYE3A6NKU9 549 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 TMEM229AB2RXF0 380 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 CDX4O14627 284 aaPredicted RBP5.81□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF213O14771 459 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 ATXN7O15265 892 aaPredicted RBP5.81□□□□□ -1.48
CKAP4-203ENST00000553039 CCL16O15467 120 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF862O60290 1169 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 PPP1R11O60927 126 aaPredicted RBP5.81□□□□□ -1.48
CKAP4-203ENST00000553039 TADA2AO75478 443 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 DDHD2O94830 711 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 MICAL2O94851 1124 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 PTPN2P17706 415 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 SFPQP23246 707 aaKnown RBP eCLIP5.81□□□□□ -1.48
CKAP4-203ENST00000553039 GDI1P31150 447 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 KIF5BP33176 963 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 ZNF76P36508 570 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 EIF1AXP47813 144 aaKnown RBP5.81□□□□□ -1.48
CKAP4-203ENST00000553039 NTHL1P78549 312 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 KARSQ15046 597 aaKnown RBP5.81□□□□□ -1.48
CKAP4-203ENST00000553039 PTPAQ15257 358 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 LONRF3Q496Y0 759 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 C4orf48Q5BLP8 95 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 SWSAP1Q6NVH7 229 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 USP17L6PQ6QN14 398 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 TICAM2Q86XR7 235 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 MAP4K3Q8IVH8 894 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 NPAS3Q8IXF0 933 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 YAF2Q8IY57 180 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 HDDC3Q8N4P3 179 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 DEPDC1BQ8WUY9 529 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 LPPQ93052 612 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 MBOAT7Q96N66 472 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 PIGSQ96S52 555 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 UBAC1Q9BSL1 405 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 NUSAP1Q9BXS6 441 aaKnown RBP5.81□□□□□ -1.48
CKAP4-203ENST00000553039 GPR88Q9GZN0 384 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 CCSER2Q9H7U1 834 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 PSTPIP2Q9H939 334 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 AVENQ9NQS1 362 aaPredicted RBP5.81□□□□□ -1.48
CKAP4-203ENST00000553039 KCNH7Q9NS40 1196 aa5.81□□□□□ -1.48
CKAP4-203ENST00000553039 SALL3Q9BXA9 1300 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 PCNX2A6NKB5 2137 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 ACACAQ13085 2346 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 FNDC1Q4ZHG4 1894 aaPredicted RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 LNP1A1A4G5 178 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 C22orf31O95567 290 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 PRB1P04280 392 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 C8AP07357 584 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 RPL17P18621 184 aaKnown RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 ATP2B1P20020 1258 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 DPP6P42658 865 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 ATXN3P54252 364 aaPredicted RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 IRX4P78413 519 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 NCBP1Q09161 790 aaKnown RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 GNL2Q13823 731 aaKnown RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 GAS6Q14393 721 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 ENOX2Q16206 610 aaKnown RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 MCMDC2Q4G0Z9 681 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 USP39Q53GS9 565 aaKnown RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 IFIT1BQ5T764 474 aaKnown RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 CYP4A22Q5TCH4 519 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 TCEAL6Q6IPX3 200 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 ABHD15Q6UXT9 468 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 CCNI2Q6ZMN8 369 aaPredicted RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 HAUS6Q7Z4H7 955 aa5.8□□□□□ -1.48
CKAP4-203ENST00000553039 RAB44Q7Z6P3 723 aaPredicted RBP5.8□□□□□ -1.48
CKAP4-203ENST00000553039 MRPL10Q7Z7H8 261 aaKnown RBP5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms