RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 TAC1P20366 129 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 PIK3CAP42336 1068 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 PRELPP51888 382 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 PDIA2Q13087 525 aaKnown RBP12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 ABCB5Q2M3G0 1257 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 SYCP2LQ5T4T6 812 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 DCUN1D2Q6PH85 259 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 NLRP9Q7RTR0 991 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 CCDC125Q86Z20 511 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 PALM2Q8IXS6 379 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 FAM13CQ8NE31 585 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 ETNPPLQ8TBG4 499 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 FBXO41Q8TF61 875 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 HSPBP1Q9NZL4 362 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 NEU2Q9Y3R4 380 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 PCDHA3Q9Y5H8 950 aa12.31□□□□□ -0.44
PPFIA2-227ENST00000552948 RPS6KA4O75676 772 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 HAUS5O94927 633 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 SLITRK3O94933 977 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 KRT10P13645 584 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 RRM1P23921 792 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 EAPPQ56P03 285 aaPredicted RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 WDR44Q5JSH3 913 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 CTAGE3PQ8IX95 158 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 ACSF2Q96CM8 615 aaPredicted RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 FNBP1Q96RU3 617 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 ZCWPW1Q9H0M4 648 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 LRRC4BQ9NT99 713 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 CORO1CQ9ULV4 474 aaPredicted RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 SORBS3O60504 671 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 SMNDC1O75940 238 aaKnown RBP eCLIP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 ZSCAN5DPP0CG00 497 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 MARK3P27448 753 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 SHMT1P34896 483 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 PTDSS1P48651 473 aaKnown RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 CLK2P49760 499 aaKnown RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 ARSEP51690 589 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 BLMHQ13867 455 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 BBS9Q3SYG4 887 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 MFSD5Q6N075 450 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 EPS8L1Q8TE68 723 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 TOPORSQ9NS56 1045 aaPredicted RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 GTF3C4Q9UKN8 822 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 R3HDM2Q9Y2K5 976 aaKnown RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 TRPM3Q9HCF6 1732 aaPredicted RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 CCDC160A6NGH7 325 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 KIF3CO14782 793 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 TBX3O15119 743 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 GH2P01242 217 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 UBTFL6P0CB48 400 aaPredicted RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 MRPS35P82673 323 aaKnown RBP12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 KIF22Q14807 665 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 XKR9Q5GH70 373 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 CBWD2Q8IUF1 395 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 MAML1Q92585 1016 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 TTC1Q99614 292 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 C1orf112Q9NSG2 853 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 RAB20Q9NX57 234 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 ROBO3Q96MS0 1386 aa12.3□□□□□ -0.44
PPFIA2-227ENST00000552948 SNED1Q8TER0 1413 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 TXNDC9O14530 226 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 NDUFB10O96000 172 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 CYP11B1P15538 503 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 PAPOLAP51003 745 aaKnown RBP12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 PTF1AQ7RTS3 328 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 ZFPM1Q8IX07 1006 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 PPP1R14CQ8TAE6 165 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 MORC4Q8TE76 937 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 TMEM206Q9H813 350 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 UVRAGQ9P2Y5 699 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 ATF5Q9Y2D1 282 aaPredicted RBP12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 CAPN9O14815 690 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 MYCLP12524 364 aaPredicted RBP12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 KRT4P19013 534 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 CAV1Q03135 178 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 FAM196AQ6ZSG2 479 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 HAUS6Q7Z4H7 955 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 FAM161BQ96MY7 647 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 RILPQ96NA2 401 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 POLR3CQ9BUI4 534 aaPredicted RBP12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 KIFC3Q9BVG8 833 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 OSBPL8Q9BZF1 889 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 GPRC5CQ9NQ84 441 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 CYP39A1Q9NYL5 469 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 SEL1LQ9UBV2 794 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 MYH3P11055 1940 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 MYH1P12882 1939 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 MYH4Q9Y623 1939 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 KRT1P04264 644 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 ZCCHC18P0CG32 403 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 RPA3P35244 121 aaPredicted RBP12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 PEX5P50542 639 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 CFAP157Q5JU67 520 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 C1orf186Q6ZWK4 172 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 USP37Q86T82 979 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 ZSWIM2Q8NEG5 633 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 PYROXD1Q8WU10 500 aa12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 C12orf65Q9H3J6 166 aaKnown RBP12.29□□□□□ -0.44
PPFIA2-227ENST00000552948 DBNDD1Q9H9R9 158 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms