RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 AKR1A1P14550 325 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 MARK3P27448 753 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 CST5P28325 142 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-216ENST00000552800 AXLP30530 894 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 PHKA2P46019 1235 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 MFAP3P55082 362 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 NLRP11P59045 1033 aaKnown RBP10.6□□□□□ -0.71
TMEM116-216ENST00000552800 LACTBP83111 547 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-216ENST00000552800 APBA1Q02410 837 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 ITIH3Q06033 890 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 GRIK4Q16099 956 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 CCDC122Q5T0U0 273 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 GJC2Q5T442 439 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-216ENST00000552800 ZNF572Q7Z3I7 529 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-216ENST00000552800 SLFN11Q7Z7L1 901 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 VPS36Q86VN1 386 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 CD302Q8IX05 232 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 SAAL1Q96ER3 474 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 ERO1AQ96HE7 468 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 ZBTB45Q96K62 511 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-216ENST00000552800 KREMEN1Q96MU8 473 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 FAM213AQ9BRX8 229 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 INO80BQ9C086 356 aaPredicted RBP10.6□□□□□ -0.71
TMEM116-216ENST00000552800 ADAMTS1Q9UHI8 967 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 CDC23Q9UJX2 597 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 JRKLQ9Y4A0 524 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 PCDHGC5Q9Y5F6 944 aa10.6□□□□□ -0.71
TMEM116-216ENST00000552800 A0A0U1RQJ8 604 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 CTAGE9A4FU28 777 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 GOLGA8IPA6NC78 632 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 GOLGA8JA6NMD2 632 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 DDX3XO00571 662 aaKnown RBP eCLIP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 CES2O00748 559 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 TNPO2O14787 897 aaKnown RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 SORBS3O60504 671 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 MTA2O94776 668 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 SLU7O95391 586 aaKnown RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 VNN1O95497 513 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 CLTAP09496 248 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 SRGAP2CP0DJJ0 459 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 SSTR3P32745 418 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 PURAQ00577 322 aaKnown RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 PPFIA1Q13136 1202 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 RAPGEF1Q13905 1077 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 DEFB115Q30KQ5 88 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 MAP3K21Q5TCX8 1036 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 ATF7IP2Q5U623 682 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 CCSAPQ6IQ19 270 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 ALKBH5Q6P6C2 394 aaKnown RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 TRMT1LQ7Z2T5 733 aaKnown RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 TRAPPC11Q7Z392 1133 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 TLK2Q86UE8 772 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 RHPN2Q8IUC4 686 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 LRRC71Q8N4P6 559 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 UBR7Q8N806 425 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 KLHDC9Q8NEP7 349 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 CXorf38Q8TB03 319 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 TAS1R2Q8TE23 839 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 ATRIPQ8WXE1 791 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 DDX1Q92499 740 aaKnown RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 MSTO1Q9BUK6 570 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 KDM4CQ9H3R0 1056 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 PLEKHA5Q9HAU0 1116 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 UBE2TQ9NPD8 197 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 RBAKQ9NYW8 714 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 RNF14Q9UBS8 474 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 ZHX1Q9UKY1 873 aaPredicted RBP10.59□□□□□ -0.71
TMEM116-216ENST00000552800 DERAQ9Y315 318 aa10.59□□□□□ -0.71
TMEM116-216ENST00000552800 A0A087WZ62 844 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 SEPT4O43236 478 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 ASS1P00966 412 aaKnown RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 GNAT1P11488 350 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 ACO1P21399 889 aaKnown RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 TBXAS1P24557 533 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 CYP2C19P33261 490 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 BPIFB4P59827 614 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 CYP27A1Q02318 531 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 GFPT1Q06210 699 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 CCL14Q16627 93 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 DUOXA2Q1HG44 320 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 XKR4Q5GH76 650 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 ZNF569Q5MCW4 686 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 PRAMEF19Q5SWL8 479 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 TDRD10Q5VZ19 366 aaKnown RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 MFSD14CQ5VZR4 134 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 PPP1R2P3Q6NXS1 205 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 NFRKBQ6P4R8 1299 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 ARHGEF19Q8IW93 802 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 SLC35F6Q8N357 371 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 TRPV1Q8NER1 839 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 TRAPPC12Q8WVT3 735 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 SECISBP2LQ93073 1101 aaKnown RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 BICD1Q96G01 975 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 RPGRIP1Q96KN7 1286 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 NT5C1BQ96P26 610 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 FNBP1Q96RU3 617 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 ZIC5Q96T25 663 aa10.58□□□□□ -0.72
TMEM116-216ENST00000552800 POP1Q99575 1024 aaKnown RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 NAPGQ99747 312 aaPredicted RBP10.58□□□□□ -0.72
TMEM116-216ENST00000552800 FDXACB1Q9BRP7 624 aaPredicted RBP10.58□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms