RNA–Protein interactions for RNA: ENST00000551544.5

CACNB3-219, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 5

Gene CACNB3, Length 2,825 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-219ENST00000551544 ZNF862O60290 1169 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 MYCNP04198 464 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-219ENST00000551544 VIMP08670 466 aaKnown RBP13.92□□□□□ -0.18
CACNB3-219ENST00000551544 RRM1P23921 792 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 VPS41P49754 854 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 GHRHRQ02643 423 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 BAATQ14032 418 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-219ENST00000551544 C12orf50Q8NA57 414 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-219ENST00000551544 CCDC197Q8NCU1 140 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 ZKSCAN4Q969J2 545 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-219ENST00000551544 WNK4Q96J92 1243 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 MTFR1LQ9H019 292 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 RPAP3Q9H6T3 665 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-219ENST00000551544 SLC40A1Q9NP59 571 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 C1orf112Q9NSG2 853 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 COL4A5P29400 1685 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 ZBED4O75132 1171 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 SSTR3P32745 418 aaPredicted RBP13.92□□□□□ -0.18
CACNB3-219ENST00000551544 CHKAP35790 457 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 SWSAP1Q6NVH7 229 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 CROCCP2Q86T23 111 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 MGARPQ8TDB4 240 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 HVCN1Q96D96 273 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 FBXL18Q96ME1 805 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 HERPUD2Q9BSE4 406 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 HEMGNQ9BXL5 484 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 KIAA1683Q9H0B3 1180 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 RIPK3Q9Y572 518 aa13.92□□□□□ -0.18
CACNB3-219ENST00000551544 SCTRP47872 440 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 PREPLQ4J6C6 727 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 CCDC50Q8IVM0 306 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 MCOLN2Q8IZK6 566 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 FAM118BQ9BPY3 351 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 STMN4Q9H169 189 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 SEPT9Q9UHD8 586 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 MROH7Q68CQ1 1323 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 TNNI1P19237 187 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 RDXP35241 583 aaKnown RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 LRRC14Q15048 493 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 NIM1KQ8IY84 436 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 SPIRE2Q8WWL2 714 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 ZNF516Q92618 1163 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 ATG4CQ96DT6 458 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 ELAC2Q9BQ52 826 aaKnown RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 TMEM109Q9BVC6 243 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 AAASQ9NRG9 546 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 HAUS2Q9NVX0 235 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 TP73O15350 636 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 KIF1CO43896 1103 aaKnown RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 NR3C2P08235 984 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 UNGP13051 313 aaPredicted RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 GTF2H1P32780 548 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 GJC1P36383 396 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 GCNT1Q02742 428 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 MAP3K10Q02779 954 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 WLSQ5T9L3 541 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 SPOPLQ6IQ16 392 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 TAOK1Q7L7X3 1001 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 TAX1BP1Q86VP1 789 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 PASD1Q8IV76 773 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 ANKS4BQ8N8V4 417 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 CCT6BQ92526 530 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 NTPCRQ9BSD7 190 aaKnown RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 RNF146Q9NTX7 359 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 MAP3K20Q9NYL2 800 aaKnown RBP13.91□□□□□ -0.18
CACNB3-219ENST00000551544 DONSONQ9NYP3 566 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 WHRNQ9P202 907 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 ZNRF3Q9ULT6 936 aa13.91□□□□□ -0.18
CACNB3-219ENST00000551544 FOXO6A8MYZ6 492 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 CLGNO14967 610 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 SSR1P43307 286 aaKnown RBP13.9□□□□□ -0.18
CACNB3-219ENST00000551544 NSFP46459 744 aaKnown RBP13.9□□□□□ -0.18
CACNB3-219ENST00000551544 PSEN1P49768 467 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 CXCL9Q07325 125 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 NEDD9Q14511 834 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 TRMT10CQ7L0Y3 403 aaKnown RBP13.9□□□□□ -0.18
CACNB3-219ENST00000551544 EXOC3L1Q86VI1 746 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 MTMR14Q8NCE2 650 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 AGBL3Q8NEM8 1001 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 DYDC1Q8WWB3 177 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 PWWP2AQ96N64 755 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 FNBP1Q96RU3 617 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 CD248Q9HCU0 757 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 MCM8Q9UJA3 840 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 R3HDM2Q9Y2K5 976 aaKnown RBP13.9□□□□□ -0.18
CACNB3-219ENST00000551544 O00370 1275 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 CREB1P16220 341 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 CCND2P30279 289 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 ADCY8P40145 1251 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 ACOT2P49753 483 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 ITGA8P53708 1063 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 MCCD1P59942 119 aaPredicted RBP13.9□□□□□ -0.18
CACNB3-219ENST00000551544 CNGA2Q16280 664 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 KYNUQ16719 465 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 WDR44Q5JSH3 913 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 MAGEC3Q8TD91 643 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 ATP6V0A1Q93050 837 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 SNF8Q96H20 258 aa13.9□□□□□ -0.18
CACNB3-219ENST00000551544 POLR3FQ9H1D9 316 aaPredicted RBP13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms