RNA–Protein interactions for RNA: ENST00000550513.1

PFDN5-210, Transcript of prefoldin subunit 5, humanhuman

TSL 3

Gene PFDN5, Length 939 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN5-210ENST00000550513 FGF13Q92913 245 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 DDX27Q96GQ7 796 aaKnown RBP11.93□□□□□ -0.5
PFDN5-210ENST00000550513 PPP1R10Q96QC0 940 aaKnown RBP11.93□□□□□ -0.5
PFDN5-210ENST00000550513 RAB34Q9BZG1 259 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 GOLGA2P5Q9HBQ8 144 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 TOPORSQ9NS56 1045 aaPredicted RBP11.93□□□□□ -0.5
PFDN5-210ENST00000550513 DDX19AQ9NUU7 478 aaKnown RBP11.93□□□□□ -0.5
PFDN5-210ENST00000550513 KIAA1024Q9UPX6 916 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 CDY1Q9Y6F8 540 aa11.93□□□□□ -0.5
PFDN5-210ENST00000550513 ZNF638Q14966 1978 aaKnown RBP11.92□□□□□ -0.5
PFDN5-210ENST00000550513 CCDC169A6NNP5 214 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 K7ERI5 159 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 TRAPPC3O43617 180 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 DCNP07585 359 aaKnown RBP11.92□□□□□ -0.5
PFDN5-210ENST00000550513 TKTP29401 623 aaKnown RBP11.92□□□□□ -0.5
PFDN5-210ENST00000550513 PEX3P56589 373 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 DMP1Q13316 513 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-210ENST00000550513 RAB33AQ14088 237 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 UPP1Q16831 310 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 PABPC1LQ4VXU2 614 aaKnown RBP11.92□□□□□ -0.5
PFDN5-210ENST00000550513 NT5DC1Q5TFE4 455 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 ZC3H14Q6PJT7 736 aaKnown RBP11.92□□□□□ -0.5
PFDN5-210ENST00000550513 ANKS3Q6ZW76 656 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 CEP120Q8N960 986 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 C3orf58Q8NDZ4 430 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 CCDC94Q9BW85 323 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-210ENST00000550513 FOXQ1Q9C009 403 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 CDT1Q9H211 546 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 POLD4Q9HCU8 107 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 HCFC1R1Q9NWW0 138 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 TNFSF13BQ9Y275 285 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 SIT1Q9Y3P8 196 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 STK24Q9Y6E0 443 aa11.92□□□□□ -0.5
PFDN5-210ENST00000550513 PTPRZ1P23471 2315 aaPredicted RBP11.92□□□□□ -0.5
PFDN5-210ENST00000550513 DMXL1Q9Y485 3027 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 I3L4J1 428 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 SEC24BO95487 1268 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 GRM5P41594 1212 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 BRCC3P46736 316 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 OSTNP61366 133 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 UVSSAQ2YD98 709 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 NPAS3Q8IXF0 933 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 IGSF22Q8N9C0 903 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 ITFG1Q8TB96 612 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 ING5Q8WYH8 240 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 SHDQ96IW2 340 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 DRC1Q96MC2 740 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 KXD1Q9BQD3 176 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 RPP25Q9BUL9 199 aaKnown RBP11.91□□□□□ -0.5
PFDN5-210ENST00000550513 MRPL4Q9BYD3 311 aaKnown RBP11.91□□□□□ -0.5
PFDN5-210ENST00000550513 SH2B1Q9NRF2 756 aaPredicted RBP11.91□□□□□ -0.5
PFDN5-210ENST00000550513 SLC38A7Q9NVC3 462 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 DLGAP2Q9P1A6 1054 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 BACE2Q9Y5Z0 518 aa11.91□□□□□ -0.5
PFDN5-210ENST00000550513 SMIM28A0A1B0GU29 152 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 E9PMD0 336 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 LAD1O00515 517 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 PODXLO00592 558 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 HIP1RO75146 1068 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 IGFBP6P24592 240 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-210ENST00000550513 NPTX2P47972 431 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 STARD6P59095 220 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 GPC5P78333 572 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 ROR1Q01973 937 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 SOX4Q06945 474 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-210ENST00000550513 PTGDRQ13258 359 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 PDIA5Q14554 519 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 MLF2Q15773 248 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-210ENST00000550513 KRT79Q5XKE5 535 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 RSPO2Q6UXX9 243 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-210ENST00000550513 RTL10Q7L3V2 364 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 DAW1Q8N136 415 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 C4orf32Q8N8J7 132 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 KCNG4Q8TDN1 519 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 ZSCAN31Q96LW9 406 aaPredicted RBP11.9□□□□□ -0.5
PFDN5-210ENST00000550513 ACO2Q99798 780 aaKnown RBP11.9□□□□□ -0.5
PFDN5-210ENST00000550513 SEMA4AQ9H3S1 761 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 KMT5AQ9NQR1 393 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 ARHGAP28Q9P2N2 729 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 DNMT3BQ9UBC3 853 aaKnown RBP11.9□□□□□ -0.5
PFDN5-210ENST00000550513 KCNH3Q9ULD8 1083 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 DNM3Q9UQ16 869 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 PCDHB6Q9Y5E3 794 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 R4GN57 208 aa11.9□□□□□ -0.5
PFDN5-210ENST00000550513 KANSL1LA0AUZ9 987 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 WDR27A2RRH5 827 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 PP2D1A8MPX8 630 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 LMNAP02545 664 aaKnown RBP11.89□□□□□ -0.51
PFDN5-210ENST00000550513 LRG1P02750 347 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 MCF2P10911 925 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 HARSP12081 509 aaKnown RBP11.89□□□□□ -0.51
PFDN5-210ENST00000550513 U2AF2P26368 475 aaKnown RBP eCLIP11.89□□□□□ -0.512e-15■■■■■ 33.6
PFDN5-210ENST00000550513 TOB1P50616 345 aaPredicted RBP11.89□□□□□ -0.51
PFDN5-210ENST00000550513 FOXK2Q01167 660 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 PFKPQ01813 784 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 PRKCQQ04759 706 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 SNW1Q13573 536 aaKnown RBP11.89□□□□□ -0.51
PFDN5-210ENST00000550513 VARS2Q5ST30 1063 aaKnown RBP11.89□□□□□ -0.51
PFDN5-210ENST00000550513 SLC8B1Q6J4K2 584 aa11.89□□□□□ -0.51
PFDN5-210ENST00000550513 MPZL3Q6UWV2 235 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms