RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PARM1Q6UWI2 310 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 FGF14Q92915 247 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 DRC1Q96MC2 740 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 TCHPQ9BT92 498 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 MRPL4Q9BYD3 311 aaKnown RBP25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 C17orf75Q9HAS0 396 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 CDY1Q9Y6F8 540 aa25.33■■□□□ 1.65
SMARCD1-209ENST00000550477 DOCK6Q96HP0 2047 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 DCNP07585 359 aaKnown RBP25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 GRM5P41594 1212 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 PEX3P56589 373 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 STARD6P59095 220 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 NTHL1P78549 312 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 PRKCQQ04759 706 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 ST3GAL1Q11201 340 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 UPP1Q16831 310 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 ZNF568Q3ZCX4 644 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 C1orf210Q8IVY1 113 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 POLD4Q9HCU8 107 aa25.32■■□□□ 1.64
SMARCD1-209ENST00000550477 SMIM28A0A1B0GU29 152 aa25.31■■□□□ 1.64
SMARCD1-209ENST00000550477 ADAM12O43184 909 aa25.31■■□□□ 1.64
SMARCD1-209ENST00000550477 BORCS6Q96GS4 357 aa25.31■■□□□ 1.64
SMARCD1-209ENST00000550477 ACAP3Q96P50 834 aa25.31■■□□□ 1.64
SMARCD1-209ENST00000550477 BCO2Q9BYV7 579 aa25.31■■□□□ 1.64
SMARCD1-209ENST00000550477 CXCL16Q9H2A7 254 aa25.31■■□□□ 1.64
SMARCD1-209ENST00000550477 KMT5AQ9NQR1 393 aa25.31■■□□□ 1.64
SMARCD1-209ENST00000550477 MRPS23Q9Y3D9 190 aaKnown RBP25.31■■□□□ 1.64
SMARCD1-209ENST00000550477 KANSL1LA0AUZ9 987 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 LRG1P02750 347 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 PTGDRQ13258 359 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 ECM1Q16610 540 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 RSPO2Q6UXX9 243 aaPredicted RBP25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 PJA1Q8NG27 643 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 ZNF461Q8TAF7 563 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 ACO2Q99798 780 aaKnown RBP25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 RPP25Q9BUL9 199 aaKnown RBP25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 TIPINQ9BVW5 301 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 KIF3AQ9Y496 699 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 NUB1Q9Y5A7 615 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 TRIP11Q15643 1979 aa25.3■■□□□ 1.64
SMARCD1-209ENST00000550477 H7C4K7 107 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 EDN1P05305 212 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 PTPN2P17706 415 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 TKTP29401 623 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 RPL9P32969 192 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 ID4P47928 161 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 NPTX2P47972 431 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 OSTNP61366 133 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 SNW1Q13573 536 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 MLF2Q15773 248 aaPredicted RBP25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 SLC44A4Q53GD3 710 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 DTHD1Q6ZMT9 781 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 C4orf32Q8N8J7 132 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 IGSF22Q8N9C0 903 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 ST13P5Q8NFI4 369 aaPredicted RBP25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 ITFG1Q8TB96 612 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 GDE1Q9NZC3 331 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 DNMT3BQ9UBC3 853 aaKnown RBP25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 VWA8A3KMH1 1905 aa25.29■■□□□ 1.64
SMARCD1-209ENST00000550477 PRRG1O14668 218 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 NCAM2O15394 837 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 HIP1RO75146 1068 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 MCF2P10911 925 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 MAGEA9P43362 315 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 STRN3Q13033 797 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 ERMP1Q7Z2K6 904 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 NELL2Q99435 816 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 OSBPL6Q9BZF3 934 aa25.28■■□□□ 1.64
SMARCD1-209ENST00000550477 PODXLO00592 558 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 SYN3O14994 580 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 U2AF2P26368 475 aaKnown RBP eCLIP25.27■■□□□ 1.644e-7■■□□□ 13.2
SMARCD1-209ENST00000550477 BRCC3P46736 316 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 SMTNP53814 917 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 XKR4Q5GH76 650 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 SLC8B1Q6J4K2 584 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 ALKAL1Q6UXT8 129 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 ELMOD1Q8N336 334 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 KCTD17Q8N5Z5 321 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 HINFPQ9BQA5 517 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 FOXQ1Q9C009 403 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 CDT1Q9H211 546 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 GOLGA2P5Q9HBQ8 144 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 DLGAP2Q9P1A6 1054 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 MYH15Q9Y2K3 1946 aa25.27■■□□□ 1.64
SMARCD1-209ENST00000550477 E9PMD0 336 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 ZNF197O14709 1029 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 RHOP08100 348 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 SP9P0CG40 484 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 PRPHP41219 470 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 UBXN2BQ14CS0 331 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 MPZL3Q6UWV2 235 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 NPAS3Q8IXF0 933 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 TARS2Q9BW92 718 aaKnown RBP25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 PTPRHQ9HD43 1115 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 HCFC1R1Q9NWW0 138 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 ARHGAP28Q9P2N2 729 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 MRPS17Q9Y2R5 130 aaKnown RBP25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 R4GN57 208 aa25.26■■□□□ 1.63
SMARCD1-209ENST00000550477 LAMTOR5O43504 91 aa25.25■■□□□ 1.63
SMARCD1-209ENST00000550477 ECI2O75521 394 aa25.25■■□□□ 1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms