RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 USP41Q3LFD5 358 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 LILRA6Q6PI73 481 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 SV2BQ7L1I2 683 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 RNF135Q8IUD6 432 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 GLIS3Q8NEA6 775 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 LNX1Q8TBB1 728 aaPredicted RBP12.91□□□□□ -0.34
LETMD1-221ENST00000550100 HPS3Q969F9 1004 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 ZNF396Q96N95 335 aaPredicted RBP12.91□□□□□ -0.34
LETMD1-221ENST00000550100 CLSTN3Q9BQT9 956 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 PHF7Q9BWX1 381 aaPredicted RBP12.91□□□□□ -0.34
LETMD1-221ENST00000550100 CCDC39Q9UFE4 941 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 TUBGCP4Q9UGJ1 667 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 PCDHA7Q9UN72 937 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 FAM50BQ9Y247 325 aa12.91□□□□□ -0.34
LETMD1-221ENST00000550100 PDCD11Q14690 1871 aaKnown RBP12.9□□□□□ -0.34
LETMD1-221ENST00000550100 C2orf16Q68DN1 1984 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 A0A0B4J269 797 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 TTC26A0AVF1 554 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 LACTBL1A8MY62 500 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 CLDN3O15551 220 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 NR1I2O75469 434 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 RFPL2O75678 378 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 HSP90AA1P07900 732 aaKnown RBP12.9□□□□□ -0.34
LETMD1-221ENST00000550100 ADSSP30520 456 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 STAT6P42226 847 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 GUCY2FP51841 1108 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 BMS1Q14692 1282 aaKnown RBP12.9□□□□□ -0.34
LETMD1-221ENST00000550100 ZBTB6Q15916 424 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 ENOX2Q16206 610 aaKnown RBP12.9□□□□□ -0.34
LETMD1-221ENST00000550100 SCARA3Q6AZY7 606 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 DCLRE1AQ6PJP8 1040 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 CEP57Q86XR8 500 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 EMILIN2Q9BXX0 1053 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 MUTYHQ9UIF7 546 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 TECTAO75443 2155 aa12.9□□□□□ -0.34
LETMD1-221ENST00000550100 MTCL1Q9Y4B5 1905 aaKnown RBP12.89□□□□□ -0.35
LETMD1-221ENST00000550100 FSD2A1L4K1 749 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 FRMD3A2A2Y4 597 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 TGM5O43548 720 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 CUTAO60888 179 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 TBCAO75347 108 aaKnown RBP12.89□□□□□ -0.35
LETMD1-221ENST00000550100 B3GAT3O94766 335 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 ADRB2P07550 413 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 FGFR3P22607 806 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 TKTP29401 623 aaKnown RBP12.89□□□□□ -0.35
LETMD1-221ENST00000550100 CASP1P29466 404 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 LIG4P49917 911 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 YARSP54577 528 aaKnown RBP12.89□□□□□ -0.35
LETMD1-221ENST00000550100 KIAA1841Q6NSI8 718 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 CCDC73Q6ZRK6 1079 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 MAP4K3Q8IVH8 894 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 TMEM87AQ8NBN3 555 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 BICD1Q96G01 975 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 TTPALQ9BTX7 342 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 ST6GALNAC4Q9H4F1 302 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 MAN1C1Q9NR34 630 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 FNIP2Q9P278 1114 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 KCNG1Q9UIX4 513 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 RCOR1Q9UKL0 485 aa12.89□□□□□ -0.35
LETMD1-221ENST00000550100 SF3B1O75533 1304 aaKnown RBP eCLIP12.88□□□□□ -0.352e-7■■■■■ 99.9
LETMD1-221ENST00000550100 TMEM189-UBE2V1I3L0A0 370 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 PODXLO00592 558 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 PPEF2O14830 753 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
LETMD1-221ENST00000550100 CLTAP09496 248 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 HOXD13P35453 343 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 MATR3P43243 847 aaKnown RBP eCLIP12.88□□□□□ -0.35
LETMD1-221ENST00000550100 ACOT2P49753 483 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 WNT7BP56706 349 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 TPRNQ4KMQ1 711 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 CRELD2Q6UXH1 353 aaPredicted RBP12.88□□□□□ -0.35
LETMD1-221ENST00000550100 APBB1IPQ7Z5R6 666 aaPredicted RBP12.88□□□□□ -0.35
LETMD1-221ENST00000550100 GPR149Q86SP6 731 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 PPFIBP1Q86W92 1011 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 PIK3R5Q8WYR1 880 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 DHX58Q96C10 678 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 ZNF707Q96C28 371 aaPredicted RBP12.88□□□□□ -0.35
LETMD1-221ENST00000550100 FAM84AQ96KN4 292 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 LRFN3Q9BTN0 628 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 DZANK1Q9NVP4 752 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 KBTBD4Q9NVX7 518 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 STK39Q9UEW8 545 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 STYXL1Q9Y6J8 313 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 ANK1P16157 1881 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 TCHHQ07283 1943 aa12.88□□□□□ -0.35
LETMD1-221ENST00000550100 C2CD4DB7Z1M9 353 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 H0YCG3 227 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 OGTO15294 1046 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 ADH1AP07327 375 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 SRGAP2BP0DMP2 458 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 TXLNAP40222 546 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 ITIH3Q06033 890 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 RESP18Q5W5W9 173 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 DDX27Q96GQ7 796 aaKnown RBP12.87□□□□□ -0.35
LETMD1-221ENST00000550100 SMOC2Q9H3U7 446 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 MRPL44Q9H9J2 332 aaKnown RBP12.87□□□□□ -0.35
LETMD1-221ENST00000550100 TOPORSQ9NS56 1045 aaPredicted RBP12.87□□□□□ -0.35
LETMD1-221ENST00000550100 PANK4Q9NVE7 773 aa12.87□□□□□ -0.35
LETMD1-221ENST00000550100 CPSF3Q9UKF6 684 aaKnown RBP12.87□□□□□ -0.35
LETMD1-221ENST00000550100 WDFY4Q6ZS81 3184 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms