RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 RAG1P15918 1043 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 PON1P27169 355 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 CCL23P55773 120 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 TFAMQ00059 246 aaKnown RBP18.79■□□□□ 0.6
LETMD1-220ENST00000549686 SMYD5Q6GMV2 418 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 JADE1Q6IE81 842 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 TRIM65Q6PJ69 517 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 ECHDC2Q86YB7 292 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 TMEM199Q8N511 208 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 CCDC150Q8NCX0 1101 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 ZNF397Q8NF99 534 aaPredicted RBP18.79■□□□□ 0.6
LETMD1-220ENST00000549686 RSPH1Q8WYR4 309 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 ZNF516Q92618 1163 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 CRACR2AQ9BSW2 395 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 HTATIP2Q9BUP3 242 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 APOL6Q9BWW8 343 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 LSM14BQ9BX40 385 aaKnown RBP18.79■□□□□ 0.6
LETMD1-220ENST00000549686 INTS2Q9H0H0 1204 aaKnown RBP18.79■□□□□ 0.6
LETMD1-220ENST00000549686 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
LETMD1-220ENST00000549686 RAB20Q9NX57 234 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 PRKAG2Q9UGJ0 569 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 HES2Q9Y543 173 aa18.79■□□□□ 0.6
LETMD1-220ENST00000549686 TDRD10Q5VZ19 366 aaKnown RBP18.78■□□□□ 0.6
LETMD1-220ENST00000549686 MFSD5Q6N075 450 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 TRAPPC11Q7Z392 1133 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 CNGA4Q8IV77 575 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 EFCAB13Q8IY85 973 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 RPUSD2Q8IZ73 545 aaKnown RBP18.78■□□□□ 0.6
LETMD1-220ENST00000549686 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 OR5B17Q8NGF7 314 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 KIF12Q96FN5 646 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 SCLYQ96I15 445 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 IMPG2Q9BZV3 1241 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 NUCKS1Q9H1E3 243 aaKnown RBP18.78■□□□□ 0.6
LETMD1-220ENST00000549686 PRDM5Q9NQX1 630 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-220ENST00000549686 FAM207AQ9NSI2 230 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-220ENST00000549686 SLC38A7Q9NVC3 462 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 CEP72Q9P209 647 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 ITGA11Q9UKX5 1188 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 CAPN11Q9UMQ6 739 aa18.78■□□□□ 0.6
LETMD1-220ENST00000549686 UBQLN1Q9UMX0 589 aaKnown RBP18.78■□□□□ 0.6
LETMD1-220ENST00000549686 R3HCC1Q9Y3T6 440 aaKnown RBP18.78■□□□□ 0.6
LETMD1-220ENST00000549686 PTPRJQ12913 1337 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 AKR1B15C9JRZ8 316 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-220ENST00000549686 MEFVO15553 781 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-220ENST00000549686 EFCAB14O75071 495 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 NFICP08651 508 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 SLC9A1P19634 815 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 CYP3A5P20815 502 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 AKAP5P24588 427 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
LETMD1-220ENST00000549686 PIK3CAP42336 1068 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 TRPC3Q13507 836 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 WDR44Q5JSH3 913 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 KLHDC7AQ5VTJ3 777 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 LMBRD2Q68DH5 695 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-220ENST00000549686 CNKSR3Q6P9H4 555 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 ZNF598Q86UK7 904 aaKnown RBP18.77■□□□□ 0.6
LETMD1-220ENST00000549686 FMNL3Q8IVF7 1028 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 LMO3Q8TAP4 145 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 TAS1R2Q8TE23 839 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 TAF4BQ92750 862 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 FAXDC2Q96IV6 333 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 RPS6KC1Q96S38 1066 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 TTYH3Q9C0H2 523 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 MTMR12Q9C0I1 747 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 APEX2Q9UBZ4 518 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 MYO6Q9UM54 1294 aa18.77■□□□□ 0.6
LETMD1-220ENST00000549686 LUC7L2Q9Y383 392 aaKnown RBP18.77■□□□□ 0.6
LETMD1-220ENST00000549686 SMIM28A0A1B0GU29 152 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 TRIM43BA6NCK2 446 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 INPPL1O15357 1258 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 HLA-DRAP01903 254 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 GYPCP04921 128 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 KLK7P49862 253 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 ZBED6P86452 979 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 NCOA4Q13772 614 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 IKBKEQ14164 716 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 ZBTB6Q15916 424 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 PTPN21Q16825 1174 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 ENOSF1Q7L5Y1 443 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 CACNA2D4Q7Z3S7 1137 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 RTN4RL1Q86UN2 441 aaPredicted RBP18.76■□□□□ 0.59
LETMD1-220ENST00000549686 TRIM43Q96BQ3 446 aaPredicted RBP18.76■□□□□ 0.59
LETMD1-220ENST00000549686 NT5C1BQ96P26 610 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 GANQ9H2C0 597 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 RSAD1Q9HA92 442 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 TMEM161AQ9NX61 479 aa18.76■□□□□ 0.59
LETMD1-220ENST00000549686 TANC1Q9C0D5 1861 aa18.75■□□□□ 0.59
LETMD1-220ENST00000549686 ENPP3O14638 875 aa18.75■□□□□ 0.59
LETMD1-220ENST00000549686 HOXA2O43364 376 aa18.75■□□□□ 0.59
LETMD1-220ENST00000549686 NRDCO43847 1150 aa18.75■□□□□ 0.59
LETMD1-220ENST00000549686 UCHL3P15374 230 aa18.75■□□□□ 0.59
LETMD1-220ENST00000549686 ATF7P17544 494 aaPredicted RBP18.75■□□□□ 0.59
LETMD1-220ENST00000549686 ATICP31939 592 aa18.75■□□□□ 0.59
LETMD1-220ENST00000549686 RBP5P82980 135 aa18.75■□□□□ 0.59
LETMD1-220ENST00000549686 SGSM1Q2NKQ1 1148 aa18.75■□□□□ 0.59
LETMD1-220ENST00000549686 TSR1Q2NL82 804 aaKnown RBP18.75■□□□□ 0.59
LETMD1-220ENST00000549686 AGMOQ6ZNB7 445 aa18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 60.1 ms