RNA–Protein interactions for RNA: ENST00000549550.1

TCHP-208, Transcript of trichoplein keratin filament binding, humanhuman

TSL 3

Gene TCHP, Length 465 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCHP-208ENST00000549550 FBXO18Q8NFZ0 1043 aa17.12■□□□□ 0.33
TCHP-208ENST00000549550 SLC7A14Q8TBB6 771 aa17.12■□□□□ 0.33
TCHP-208ENST00000549550 SECISBP2LQ93073 1101 aaKnown RBP17.12■□□□□ 0.33
TCHP-208ENST00000549550 C8orf76Q96K31 380 aa17.12■□□□□ 0.33
TCHP-208ENST00000549550 HCFC1R1Q9NWW0 138 aa17.12■□□□□ 0.33
TCHP-208ENST00000549550 ZSCAN32Q9NX65 697 aa17.12■□□□□ 0.33
TCHP-208ENST00000549550 SMG5Q9UPR3 1016 aaKnown RBP17.12■□□□□ 0.33
TCHP-208ENST00000549550 DGAT1O75907 488 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 TARSP26639 723 aaKnown RBP17.11■□□□□ 0.33
TCHP-208ENST00000549550 TRIM29Q14134 588 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 AXDND1Q5T1B0 1012 aaPredicted RBP17.11■□□□□ 0.33
TCHP-208ENST00000549550 TSSK4Q6SA08 328 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 TPRG1Q6ZUI0 275 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 PIK3AP1Q6ZUJ8 805 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 BRAPQ7Z569 592 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 NPAS3Q8IXF0 933 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 SLFN12Q8IYM2 578 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 ING5Q8WYH8 240 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 CDV3Q9UKY7 258 aaKnown RBP17.11■□□□□ 0.33
TCHP-208ENST00000549550 MAP1BP46821 2468 aaKnown RBP17.11■□□□□ 0.33
TCHP-208ENST00000549550 TICRRQ7Z2Z1 1910 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 RALGAPA1Q6GYQ0 2036 aa17.11■□□□□ 0.33
TCHP-208ENST00000549550 CHD8Q9HCK8 2581 aa17.1■□□□□ 0.33
TCHP-208ENST00000549550 PTGESO14684 152 aa17.1■□□□□ 0.33
TCHP-208ENST00000549550 LILRB5O75023 590 aa17.1■□□□□ 0.33
TCHP-208ENST00000549550 LMNB2Q03252 620 aa17.1■□□□□ 0.33
TCHP-208ENST00000549550 PABPC1LQ4VXU2 614 aaKnown RBP17.1■□□□□ 0.33
TCHP-208ENST00000549550 OXER1Q8TDS5 423 aa17.1■□□□□ 0.33
TCHP-208ENST00000549550 NELL1Q92832 810 aa17.1■□□□□ 0.33
TCHP-208ENST00000549550 CLDN23Q96B33 292 aa17.1■□□□□ 0.33
TCHP-208ENST00000549550 CCDC43Q96MW1 224 aaKnown RBP17.1■□□□□ 0.33
TCHP-208ENST00000549550 NAP1L4Q99733 375 aaKnown RBP17.1■□□□□ 0.33
TCHP-208ENST00000549550 EIF2AK1Q9BQI3 630 aaKnown RBP17.1■□□□□ 0.33
TCHP-208ENST00000549550 POLR3FQ9H1D9 316 aaPredicted RBP17.1■□□□□ 0.33
TCHP-208ENST00000549550 ANKEF1Q9NU02 776 aa17.1■□□□□ 0.33
TCHP-208ENST00000549550 DNMT3BQ9UBC3 853 aaKnown RBP17.1■□□□□ 0.33
TCHP-208ENST00000549550 PRR5-ARHGAP8B1AHC4 643 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 POU2F2P09086 479 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 OR1D2P34982 312 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 RPS9P46781 194 aaKnown RBP17.09■□□□□ 0.33
TCHP-208ENST00000549550 ARHGAP8P85298 464 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 ELAVL2Q12926 359 aaKnown RBP17.09■□□□□ 0.33
TCHP-208ENST00000549550 RAB33AQ14088 237 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 PDXDC1Q6P996 788 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 NELL2Q99435 816 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 SCAND2PQ9GZW5 306 aaPredicted RBP17.09■□□□□ 0.33
TCHP-208ENST00000549550 CXCL16Q9H2A7 254 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 GJB4Q9NTQ9 266 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 KCNH3Q9ULD8 1083 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 USP18Q9UMW8 372 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 COL4A2P08572 1712 aa17.09■□□□□ 0.33
TCHP-208ENST00000549550 PDCD11Q14690 1871 aaKnown RBP17.08■□□□□ 0.33
TCHP-208ENST00000549550 LRRIQ4A6NIV6 560 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 NCAM2O15394 837 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 LYPLA2O95372 231 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 THP07101 528 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 RARRES1P49788 294 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 KRT85P78386 507 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 UVSSAQ2YD98 709 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 EARS2Q5JPH6 523 aaKnown RBP17.08■□□□□ 0.32
TCHP-208ENST00000549550 HSD17B14Q9BPX1 270 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 PLA2G2FQ9BZM2 168 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 PRMT8Q9NR22 394 aaPredicted RBP17.08■□□□□ 0.32
TCHP-208ENST00000549550 HEBP1Q9NRV9 189 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 SNTG2Q9NY99 539 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 CFAP45Q9UL16 551 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 MRPS23Q9Y3D9 190 aaKnown RBP17.08■□□□□ 0.32
TCHP-208ENST00000549550 F5P12259 2224 aa17.08■□□□□ 0.32
TCHP-208ENST00000549550 CFAP47Q6ZTR5 3102 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 DCDC2BA2VCK2 349 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 FAM205CA6NFA0 338 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 TTLL13PA6NNM8 815 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 USO1O60763 962 aaKnown RBP17.07■□□□□ 0.32
TCHP-208ENST00000549550 ECI2O75521 394 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 RECQL4O94761 1208 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 TGM1P22735 817 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 MTAPQ13126 283 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 RESTQ13127 1097 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 FZD5Q13467 585 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 SAFBQ15424 915 aaKnown RBP eCLIP17.07■□□□□ 0.32
TCHP-208ENST00000549550 NAB2Q15742 525 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 SLC5A9Q2M3M2 681 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 PDZRN4Q6ZMN7 1036 aaPredicted RBP17.07■□□□□ 0.32
TCHP-208ENST00000549550 ZNF852Q6ZMS4 543 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 PPP4R3CPQ6ZMV5 832 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 PIGOQ8TEQ8 1089 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 MCRS1Q96EZ8 462 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 PRIMPOLQ96LW4 560 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 ZNF396Q96N95 335 aaPredicted RBP17.07■□□□□ 0.32
TCHP-208ENST00000549550 GPRC5CQ9NQ84 441 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 PRMT7Q9NVM4 692 aaPredicted RBP17.07■□□□□ 0.32
TCHP-208ENST00000549550 PCDHA12Q9UN75 941 aa17.07■□□□□ 0.32
TCHP-208ENST00000549550 A0A087WWV3 80 aa17.06■□□□□ 0.32
TCHP-208ENST00000549550 SHISA7A6NL88 538 aa17.06■□□□□ 0.32
TCHP-208ENST00000549550 TBC1D4O60343 1298 aa17.06■□□□□ 0.32
TCHP-208ENST00000549550 MBD3O95983 291 aa17.06■□□□□ 0.32
TCHP-208ENST00000549550 RHOP08100 348 aa17.06■□□□□ 0.32
TCHP-208ENST00000549550 FGFR3P22607 806 aa17.06■□□□□ 0.32
TCHP-208ENST00000549550 ADCY1Q08828 1119 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms