RNA–Protein interactions for RNA: ENST00000549534.1

TROAP-210, Transcript of trophinin associated protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene TROAP, Length 839 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-210ENST00000549534 SDF4Q9BRK5 362 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 GPR88Q9GZN0 384 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 TMEM74BQ9NUR3 256 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 PKD2L1Q9P0L9 805 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 SEPT3Q9UH03 358 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 UBIAD1Q9Y5Z9 338 aa11.86□□□□□ -0.51
TROAP-210ENST00000549534 ATG2BQ96BY7 2078 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 NRG2O14511 850 aaPredicted RBP11.85□□□□□ -0.51
TROAP-210ENST00000549534 TLX3O43711 291 aaPredicted RBP11.85□□□□□ -0.51
TROAP-210ENST00000549534 CBFA2T3O75081 653 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 BCKDHBP21953 392 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 CLCN3P51790 818 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 AFF1P51825 1210 aaKnown RBP11.85□□□□□ -0.51
TROAP-210ENST00000549534 TLE3Q04726 772 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 RAB33AQ14088 237 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 TMEM196Q5HYL7 178 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 PRSS55Q6UWB4 352 aaPredicted RBP11.85□□□□□ -0.51
TROAP-210ENST00000549534 SIRT2Q8IXJ6 389 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 LINC01465Q8N7H1 131 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 ACDQ96AP0 544 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 GCOM2Q9BZD3 368 aaPredicted RBP11.85□□□□□ -0.51
TROAP-210ENST00000549534 FAM117AQ9C073 453 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 INO80BQ9C086 356 aaPredicted RBP11.85□□□□□ -0.51
TROAP-210ENST00000549534 KAT14Q9H8E8 782 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 CAPN10Q9HC96 672 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 PILRBQ9UKJ0 227 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 PIN4Q9Y237 131 aaKnown RBP11.85□□□□□ -0.51
TROAP-210ENST00000549534 PCDHB2Q9Y5E7 798 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 MGAQ8IWI9 3026 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 PTPRBP23467 1997 aa11.85□□□□□ -0.51
TROAP-210ENST00000549534 PALM3A6NDB9 673 aaPredicted RBP11.84□□□□□ -0.51
TROAP-210ENST00000549534 ARHGAP33O14559 1287 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 GJB3O75712 270 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 POU3F2P20265 443 aaPredicted RBP11.84□□□□□ -0.51
TROAP-210ENST00000549534 GRM4Q14833 912 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 FBXO43Q4G163 708 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 ARHGAP29Q52LW3 1261 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 RTP2Q5QGT7 225 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 LMBRD2Q68DH5 695 aaPredicted RBP11.84□□□□□ -0.51
TROAP-210ENST00000549534 EFCAB12Q6NXP0 572 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 CASC1Q6TDU7 716 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 PDZD4Q76G19 769 aaPredicted RBP11.84□□□□□ -0.51
TROAP-210ENST00000549534 TMC8Q8IU68 726 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 CMTR1Q8N1G2 835 aaKnown RBP11.84□□□□□ -0.51
TROAP-210ENST00000549534 SMARCC2Q8TAQ2 1214 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 LNX1Q8TBB1 728 aaPredicted RBP11.84□□□□□ -0.51
TROAP-210ENST00000549534 ZSCAN18Q8TBC5 510 aaPredicted RBP11.84□□□□□ -0.51
TROAP-210ENST00000549534 NLRP7Q8WX94 980 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 CUL5Q93034 780 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 TRIM4Q9C037 500 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 ADAM28Q9UKQ2 775 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 PCOLCE2Q9UKZ9 415 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 INVSQ9Y283 1065 aa11.84□□□□□ -0.51
TROAP-210ENST00000549534 MUC22E2RYF6 1773 aaPredicted RBP11.84□□□□□ -0.51
TROAP-210ENST00000549534 SF3B1O75533 1304 aaKnown RBP eCLIP11.84□□□□□ -0.51
TROAP-210ENST00000549534 PIK3CDO00329 1044 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 BACH1O14867 736 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 RNF40O75150 1001 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 AFPP02771 609 aaKnown RBP11.83□□□□□ -0.52
TROAP-210ENST00000549534 UCNP55089 124 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 DMC1Q14565 340 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 SMAD1Q15797 465 aaKnown RBP11.83□□□□□ -0.52
TROAP-210ENST00000549534 PSMD5Q16401 504 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 CYP4A22Q5TCH4 519 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 LYSMD4Q5XG99 296 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 ATG14Q6ZNE5 492 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 RASSF3Q86WH2 238 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 TICAM2Q86XR7 235 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 LEMD2Q8NC56 503 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 DAGLBQ8NCG7 672 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 ZSWIM3Q96MP5 696 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 TTPALQ9BTX7 342 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 ZNF302Q9NR11 478 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 GTSE1Q9NYZ3 720 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 HSPBP1Q9NZL4 362 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 MYH6P13533 1939 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 TTC41PQ6P2S7 1318 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 AHCTF1Q8WYP5 2266 aa11.83□□□□□ -0.52
TROAP-210ENST00000549534 ARHGEF37A1IGU5 675 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 TRDMT1O14717 391 aaKnown RBP11.82□□□□□ -0.52
TROAP-210ENST00000549534 FOXP2O15409 715 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 LRG1P02750 347 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 PLCB2Q00722 1185 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 MAPK8IP2Q13387 824 aaPredicted RBP11.82□□□□□ -0.52
TROAP-210ENST00000549534 FSTL4Q6MZW2 842 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 ABHD15Q6UXT9 468 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 ABCA7Q8IZY2 2146 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 CNNM3Q8NE01 707 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 TSTD1Q8NFU3 115 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 TTC9Q92623 222 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 TCEAL4Q96EI5 215 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 CNOT6LQ96LI5 555 aaKnown RBP11.82□□□□□ -0.52
TROAP-210ENST00000549534 PSMG3-AS1Q96PY0 264 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 SEC62Q99442 399 aaKnown RBP11.82□□□□□ -0.52
TROAP-210ENST00000549534 LNPKQ9C0E8 428 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 TOR4AQ9NXH8 423 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 NCANO14594 1321 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 LRRK2Q5S007 2527 aa11.82□□□□□ -0.52
TROAP-210ENST00000549534 PDCD11Q14690 1871 aaKnown RBP11.81□□□□□ -0.52
TROAP-210ENST00000549534 KLRF2D3W0D1 207 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms