RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 XYLBO75191 536 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 NR1I2O75469 434 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 LYPLA2O95372 231 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 SRGAP2CP0DJJ0 459 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 ITGA4P13612 1032 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 AXLP30530 894 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 KRT2P35908 639 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 MLH1P40692 756 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 SATB1Q01826 763 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 SRSF5Q13243 272 aaKnown RBP13.51□□□□□ -0.25
DDX54-206ENST00000549271 MXD4Q14582 209 aaPredicted RBP13.51□□□□□ -0.25
DDX54-206ENST00000549271 EMC2Q15006 297 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 RTP2Q5QGT7 225 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 LIN9Q5TKA1 542 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 POTEHQ6S545 545 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 FERMT3Q86UX7 667 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 CCDC83Q8IWF9 413 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 ZSCAN31Q96LW9 406 aaPredicted RBP13.51□□□□□ -0.25
DDX54-206ENST00000549271 ZFP42Q96MM3 310 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 CLSTN3Q9BQT9 956 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 HCFC1R1Q9NWW0 138 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 DNMT3BQ9UBC3 853 aaKnown RBP13.51□□□□□ -0.25
DDX54-206ENST00000549271 IPPQ9Y573 584 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 ITPR1Q14643 2758 aa13.51□□□□□ -0.25
DDX54-206ENST00000549271 PDCD11Q14690 1871 aaKnown RBP13.5□□□□□ -0.25
DDX54-206ENST00000549271 ARID2Q68CP9 1835 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 SOBPA7XYQ1 873 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 CHURC1-FNTBB4DL54 471 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 SLITRK3O94933 977 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 BAG4O95429 457 aaKnown RBP13.5□□□□□ -0.25
DDX54-206ENST00000549271 CXCL12P48061 93 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 FNTBP49356 437 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 FOSBP53539 338 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 PTENP60484 403 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 GAS6Q14393 721 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 AASDHQ4L235 1098 aaPredicted RBP13.5□□□□□ -0.25
DDX54-206ENST00000549271 PABPC1LQ4VXU2 614 aaKnown RBP13.5□□□□□ -0.25
DDX54-206ENST00000549271 POTEDQ86YR6 584 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 FAM160A2Q8N612 972 aaPredicted RBP13.5□□□□□ -0.25
DDX54-206ENST00000549271 RNF149Q8NC42 400 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 GSTCDQ8NEC7 633 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 ELSPBP1Q96BH3 223 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 DYDC2Q96IM9 177 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 HSD17B14Q9BPX1 270 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 LLPHQ9BRT6 129 aaKnown RBP13.5□□□□□ -0.25
DDX54-206ENST00000549271 TMEM121BQ9BXQ6 578 aaPredicted RBP13.5□□□□□ -0.25
DDX54-206ENST00000549271 EIF2AQ9BY44 585 aaKnown RBP13.5□□□□□ -0.25
DDX54-206ENST00000549271 LMAN1LQ9HAT1 526 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 RXFP3Q9NSD7 469 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 GDE1Q9NZC3 331 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 RGL1Q9NZL6 768 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 POLIQ9UNA4 740 aa13.5□□□□□ -0.25
DDX54-206ENST00000549271 WNT7AO00755 349 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 MARCH6O60337 910 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 KCNK5O95279 499 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 PAPSS2O95340 614 aaPredicted RBP13.49□□□□□ -0.25
DDX54-206ENST00000549271 FCARP24071 287 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 SF3A2Q15428 464 aaKnown RBP13.49□□□□□ -0.25
DDX54-206ENST00000549271 XKR9Q5GH70 373 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 NCAPH2Q6IBW4 605 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 TANGO2Q6ICL3 276 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 LONP2Q86WA8 852 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 DIS3L2Q8IYB7 885 aaKnown RBP13.49□□□□□ -0.25
DDX54-206ENST00000549271 LNX1Q8TBB1 728 aaPredicted RBP13.49□□□□□ -0.25
DDX54-206ENST00000549271 SLC7A14Q8TBB6 771 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 ING5Q8WYH8 240 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 PIK3R5Q8WYR1 880 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 MTRQ99707 1265 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 LSM14BQ9BX40 385 aaKnown RBP13.49□□□□□ -0.25
DDX54-206ENST00000549271 NFKBIZQ9BYH8 718 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 XPNPEP1Q9NQW7 623 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 ANKEF1Q9NU02 776 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 HES2Q9Y543 173 aa13.49□□□□□ -0.25
DDX54-206ENST00000549271 ZMYM2Q9UBW7 1377 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 K7ESF4 209 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 ZBTB39O15060 712 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 TSPAN1O60635 241 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 DGAT1O75907 488 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 ERLIN2O94905 339 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 ZNF806P0C7X5 589 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 CHRNB1P11230 501 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 GUCY1B3Q02153 619 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 NCBP1Q09161 790 aaKnown RBP13.48□□□□□ -0.25
DDX54-206ENST00000549271 TFDP1Q14186 410 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 CTTNQ14247 550 aaKnown RBP13.48□□□□□ -0.25
DDX54-206ENST00000549271 RABEP1Q15276 862 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 AMHR2Q16671 573 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 SLC5A9Q2M3M2 681 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 UVSSAQ2YD98 709 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 AXDND1Q5T1B0 1012 aaPredicted RBP13.48□□□□□ -0.25
DDX54-206ENST00000549271 STPG1Q5TH74 334 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 NOTUMQ6P988 496 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 LRSAM1Q6UWE0 723 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 SPEM1Q8N4L4 309 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 FAM3CQ92520 227 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 RABGGTAQ92696 567 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 MCRS1Q96EZ8 462 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 EIF2AK1Q9BQI3 630 aaKnown RBP13.48□□□□□ -0.25
DDX54-206ENST00000549271 CSRNP2Q9H175 543 aa13.48□□□□□ -0.25
DDX54-206ENST00000549271 BRMS1Q9HCU9 246 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms