RNA–Protein interactions for RNA: ENST00000548545.1

MRPL42-204, Transcript of mitochondrial ribosomal protein L42, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene MRPL42, Length 692 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL42-204ENST00000548545 CHMP4CQ96CF2 233 aa4.94□□□□□ -1.62
MRPL42-204ENST00000548545 CLIP3Q96DZ5 547 aa4.94□□□□□ -1.62
MRPL42-204ENST00000548545 MYEOVQ96EZ4 313 aa4.94□□□□□ -1.62
MRPL42-204ENST00000548545 SMAD5Q99717 465 aaKnown RBP4.94□□□□□ -1.62
MRPL42-204ENST00000548545 MYOCQ99972 504 aa4.94□□□□□ -1.62
MRPL42-204ENST00000548545 TEX101Q9BY14 249 aa4.94□□□□□ -1.62
MRPL42-204ENST00000548545 NRDE2Q9H7Z3 1164 aa4.94□□□□□ -1.62
MRPL42-204ENST00000548545 CCDC154A6NI56 674 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 RNASET2O00584 256 aaKnown RBP4.93□□□□□ -1.62
MRPL42-204ENST00000548545 RPS6KA4O75676 772 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 POMCP01189 267 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 ADH4P08319 380 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 CTXN1P60606 82 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 RAP2BP61225 183 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 BEAN1Q3B7T3 259 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 ZNF529Q6P280 563 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 Q6ZPA2 131 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 ZFPM1Q8IX07 1006 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 CMTR2Q8IYT2 770 aaKnown RBP4.93□□□□□ -1.62
MRPL42-204ENST00000548545 ULK2Q8IYT8 1036 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 DCBLD1Q8N8Z6 715 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 IFI44Q8TCB0 444 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 LARP4BQ92615 738 aaKnown RBP4.93□□□□□ -1.62
MRPL42-204ENST00000548545 MRGPRX4Q96LA9 322 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 FAM193BQ96PV7 902 aaPredicted RBP4.93□□□□□ -1.62
MRPL42-204ENST00000548545 DMRTA2Q96SC8 542 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 TCF7L1Q9HCS4 588 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 AKIP1Q9NQ31 210 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 TDP1Q9NUW8 608 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 FBXO34Q9NWN3 711 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 NIPSNAP3AQ9UFN0 247 aaPredicted RBP4.93□□□□□ -1.62
MRPL42-204ENST00000548545 REXO2Q9Y3B8 237 aaKnown RBP4.93□□□□□ -1.62
MRPL42-204ENST00000548545 PCDHA13Q9Y5I0 950 aa4.93□□□□□ -1.62
MRPL42-204ENST00000548545 NCR1O76036 304 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 SPATA31D3P0C874 917 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 LAG3P18627 525 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 GCSHP23434 173 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 BMPR1AP36894 532 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 NEK2P51955 445 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 ANAPC15P60006 121 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 IL10RAQ13651 578 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 SPATA31D4Q6ZUB0 917 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 MED25Q71SY5 747 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 ZNF627Q7L945 461 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 SYNE4Q8N205 404 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 MLST8Q9BVC4 326 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 KLHL11Q9NVR0 708 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 DDX56Q9NY93 547 aaKnown RBP4.92□□□□□ -1.62
MRPL42-204ENST00000548545 ING1Q9UK53 422 aaPredicted RBP4.92□□□□□ -1.62
MRPL42-204ENST00000548545 USP15Q9Y4E8 981 aaPredicted RBP4.92□□□□□ -1.62
MRPL42-204ENST00000548545 PCDHB1Q9Y5F3 818 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 CFAP20Q9Y6A4 193 aaKnown RBP4.92□□□□□ -1.62
MRPL42-204ENST00000548545 SHROOM4Q9ULL8 1493 aa4.92□□□□□ -1.62
MRPL42-204ENST00000548545 CENPVL1A0A0U1RR11 272 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 CFIP05156 583 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 ALAS1P13196 640 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 NCLP19338 710 aaKnown RBP4.91□□□□□ -1.62
MRPL42-204ENST00000548545 SLC6A2P23975 617 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 CCND1P24385 295 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 IGBP1P78318 339 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 DSC2Q02487 901 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 FHL2Q14192 279 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 RAB39AQ14964 217 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 UAP1L1Q3KQV9 507 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 PPP4R3AQ6IN85 833 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 CPA6Q8N4T0 437 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 OR56A1Q8NGH5 318 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 NSUN6Q8TEA1 469 aaKnown RBP4.91□□□□□ -1.62
MRPL42-204ENST00000548545 NEU4Q8WWR8 484 aaPredicted RBP4.91□□□□□ -1.62
MRPL42-204ENST00000548545 TMX3Q96JJ7 454 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 PRRX2Q99811 253 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 C11orf54Q9H0W9 315 aaPredicted RBP4.91□□□□□ -1.62
MRPL42-204ENST00000548545 CALCOCO1Q9P1Z2 691 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 RUVBL1Q9Y265 456 aaKnown RBP4.91□□□□□ -1.62
MRPL42-204ENST00000548545 FPGT-TNNI3KV9GXZ4 949 aa4.91□□□□□ -1.62
MRPL42-204ENST00000548545 PRSS23O95084 383 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 SNUPNO95149 360 aaKnown RBP4.9□□□□□ -1.63
MRPL42-204ENST00000548545 ABHD16AO95870 558 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 ELANEP08246 267 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 PDGFRBP09619 1106 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 KRT4P19013 534 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 TLE1Q04724 770 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 DPTQ07507 201 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 ATP2B3Q16720 1220 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 TIGD2Q4W5G0 525 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 LY6G5CQ5SRR4 150 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 UBE3BQ7Z3V4 1068 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 RSPH3Q86UC2 560 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 ZBTB46Q86UZ6 589 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 LDLRAD3Q86YD5 345 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 ARHGEF19Q8IW93 802 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 MIER2Q8N344 545 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 PRR18Q8N4B5 295 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 PROKR1Q8TCW9 393 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 KAT5Q92993 513 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 RAB24Q969Q5 203 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 ADAM2Q99965 735 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 ATP11BQ9Y2G3 1177 aa4.9□□□□□ -1.63
MRPL42-204ENST00000548545 TCRBV7S2A1N4TA0A589 114 aa4.89□□□□□ -1.63
MRPL42-204ENST00000548545 LPXNO60711 386 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms