RNA–Protein interactions for RNA: ENST00000548390.5

LETMD1-215, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 549 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-215ENST00000548390 C9IYK1 514 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 TULP1O00294 542 aaPredicted RBP18.79■□□□□ 0.6
LETMD1-215ENST00000548390 PHACTR2O75167 634 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 PTMAP06454 111 aaKnown RBP18.79■□□□□ 0.6
LETMD1-215ENST00000548390 PFKMP08237 780 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 RAG1P15918 1043 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 PON1P27169 355 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 CCL23P55773 120 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 TFAMQ00059 246 aaKnown RBP18.79■□□□□ 0.6
LETMD1-215ENST00000548390 SMYD5Q6GMV2 418 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 JADE1Q6IE81 842 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 TRIM65Q6PJ69 517 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 ECHDC2Q86YB7 292 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 TMEM199Q8N511 208 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 CCDC150Q8NCX0 1101 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 ZNF397Q8NF99 534 aaPredicted RBP18.79■□□□□ 0.6
LETMD1-215ENST00000548390 RSPH1Q8WYR4 309 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 ZNF516Q92618 1163 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 CRACR2AQ9BSW2 395 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 HTATIP2Q9BUP3 242 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 APOL6Q9BWW8 343 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 LSM14BQ9BX40 385 aaKnown RBP18.79■□□□□ 0.6
LETMD1-215ENST00000548390 INTS2Q9H0H0 1204 aaKnown RBP18.79■□□□□ 0.6
LETMD1-215ENST00000548390 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
LETMD1-215ENST00000548390 RAB20Q9NX57 234 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 PRKAG2Q9UGJ0 569 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 HES2Q9Y543 173 aa18.79■□□□□ 0.6
LETMD1-215ENST00000548390 TDRD10Q5VZ19 366 aaKnown RBP18.78■□□□□ 0.6
LETMD1-215ENST00000548390 MFSD5Q6N075 450 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 TRAPPC11Q7Z392 1133 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 CNGA4Q8IV77 575 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 EFCAB13Q8IY85 973 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 RPUSD2Q8IZ73 545 aaKnown RBP18.78■□□□□ 0.6
LETMD1-215ENST00000548390 BEST2Q8NFU1 509 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 OR5B17Q8NGF7 314 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 KIF12Q96FN5 646 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 SCLYQ96I15 445 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 IMPG2Q9BZV3 1241 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 NUCKS1Q9H1E3 243 aaKnown RBP18.78■□□□□ 0.6
LETMD1-215ENST00000548390 PRDM5Q9NQX1 630 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-215ENST00000548390 FAM207AQ9NSI2 230 aaPredicted RBP18.78■□□□□ 0.6
LETMD1-215ENST00000548390 SLC38A7Q9NVC3 462 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 CEP72Q9P209 647 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 ITGA11Q9UKX5 1188 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 CAPN11Q9UMQ6 739 aa18.78■□□□□ 0.6
LETMD1-215ENST00000548390 UBQLN1Q9UMX0 589 aaKnown RBP18.78■□□□□ 0.6
LETMD1-215ENST00000548390 R3HCC1Q9Y3T6 440 aaKnown RBP18.78■□□□□ 0.6
LETMD1-215ENST00000548390 PTPRJQ12913 1337 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 AKR1B15C9JRZ8 316 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-215ENST00000548390 MEFVO15553 781 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-215ENST00000548390 EFCAB14O75071 495 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 NFICP08651 508 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 SLC9A1P19634 815 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 CYP3A5P20815 502 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 AKAP5P24588 427 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 DEKP35659 375 aaKnown RBP18.77■□□□□ 0.6
LETMD1-215ENST00000548390 PIK3CAP42336 1068 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 TRPC3Q13507 836 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 WDR44Q5JSH3 913 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 KLHDC7AQ5VTJ3 777 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 LMBRD2Q68DH5 695 aaPredicted RBP18.77■□□□□ 0.6
LETMD1-215ENST00000548390 CNKSR3Q6P9H4 555 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 ZNF598Q86UK7 904 aaKnown RBP18.77■□□□□ 0.6
LETMD1-215ENST00000548390 FMNL3Q8IVF7 1028 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 LMO3Q8TAP4 145 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 TAS1R2Q8TE23 839 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 TAF4BQ92750 862 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 FAXDC2Q96IV6 333 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 RPS6KC1Q96S38 1066 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 TTYH3Q9C0H2 523 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 MTMR12Q9C0I1 747 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 RNF39Q9H2S5 420 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 APEX2Q9UBZ4 518 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 MYO6Q9UM54 1294 aa18.77■□□□□ 0.6
LETMD1-215ENST00000548390 LUC7L2Q9Y383 392 aaKnown RBP18.77■□□□□ 0.6
LETMD1-215ENST00000548390 SMIM28A0A1B0GU29 152 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 TRIM43BA6NCK2 446 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 INPPL1O15357 1258 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 HLA-DRAP01903 254 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 GYPCP04921 128 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 KLK7P49862 253 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 ZBED6P86452 979 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 NCOA4Q13772 614 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 IKBKEQ14164 716 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 ZBTB6Q15916 424 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 PTPN21Q16825 1174 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 ENOSF1Q7L5Y1 443 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 CACNA2D4Q7Z3S7 1137 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 RTN4RL1Q86UN2 441 aaPredicted RBP18.76■□□□□ 0.59
LETMD1-215ENST00000548390 TRIM43Q96BQ3 446 aaPredicted RBP18.76■□□□□ 0.59
LETMD1-215ENST00000548390 NT5C1BQ96P26 610 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 GANQ9H2C0 597 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 RSAD1Q9HA92 442 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 TMEM161AQ9NX61 479 aa18.76■□□□□ 0.59
LETMD1-215ENST00000548390 TANC1Q9C0D5 1861 aa18.75■□□□□ 0.59
LETMD1-215ENST00000548390 ENPP3O14638 875 aa18.75■□□□□ 0.59
LETMD1-215ENST00000548390 HOXA2O43364 376 aa18.75■□□□□ 0.59
LETMD1-215ENST00000548390 NRDCO43847 1150 aa18.75■□□□□ 0.59
LETMD1-215ENST00000548390 UCHL3P15374 230 aa18.75■□□□□ 0.59
LETMD1-215ENST00000548390 ATF7P17544 494 aaPredicted RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms