RNA–Protein interactions for RNA: ENST00000548080.5

HDAC7-227, Transcript of histone deacetylase 7, humanhuman

TSL 5

Gene HDAC7, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-227ENST00000548080 PTPRHQ9HD43 1115 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 AGPAT3Q9NRZ7 376 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 MIOSQ9NXC5 875 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 TRIP11Q15643 1979 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 ANKRD63C9JTQ0 380 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 HNRNPDLO14979 420 aaKnown RBP18.9■□□□□ 0.62
HDAC7-227ENST00000548080 CLIC2O15247 247 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 POMCP01189 267 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 LIG4P49917 911 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 SCNN1GP51170 649 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 SNRPFP62306 86 aaKnown RBP18.9■□□□□ 0.62
HDAC7-227ENST00000548080 SLC39A4Q6P5W5 647 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 MPZL3Q6UWV2 235 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 MAP4K3Q8IVH8 894 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 VSTM4Q8IW00 320 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 THNSL1Q8IYQ7 743 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 TBC1D13Q9NVG8 400 aa18.9■□□□□ 0.62
HDAC7-227ENST00000548080 TDRD15B5MCY1 1934 aaKnown RBP18.89■□□□□ 0.62
HDAC7-227ENST00000548080 ARL5CA6NH57 179 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 RECQL4O94761 1208 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 PROZP22891 400 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 ADGRE1Q14246 886 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 MYBPC2Q14324 1141 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 DCAF4L1Q3SXM0 396 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 CCDC40Q4G0X9 1142 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 ZNF280BQ86YH2 543 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 LRRC43Q8N309 656 aa18.89■□□□□ 0.61
HDAC7-227ENST00000548080 CLP1Q92989 425 aaKnown RBP18.89■□□□□ 0.61
HDAC7-227ENST00000548080 TRANK1O15050 2925 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 NT5C1B-RDH14C9J2C7 533 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 SLC16A3O15427 465 aaKnown RBP18.88■□□□□ 0.61
HDAC7-227ENST00000548080 TEX33O43247 280 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 ZC3H11AO75152 810 aaKnown RBP eCLIP18.88■□□□□ 0.61
HDAC7-227ENST00000548080 TOM1L1O75674 476 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 PRKCSHP14314 528 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-227ENST00000548080 IGFBP4P22692 258 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 BMPR1AP36894 532 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 MARSP56192 900 aaKnown RBP18.88■□□□□ 0.61
HDAC7-227ENST00000548080 RNASELQ05823 741 aaKnown RBP18.88■□□□□ 0.61
HDAC7-227ENST00000548080 NOLC1Q14978 699 aaKnown RBP eCLIP18.88■□□□□ 0.61
HDAC7-227ENST00000548080 TMC6Q7Z403 805 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 SLC9A9Q8IVB4 645 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 COLGALT1Q8NBJ5 622 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 TRIM44Q96DX7 344 aaPredicted RBP18.88■□□□□ 0.61
HDAC7-227ENST00000548080 DMAC2Q9NW81 257 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 IMPACTQ9P2X3 320 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 DNAJB4Q9UDY4 337 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 PLAGL2Q9UPG8 496 aa18.88■□□□□ 0.61
HDAC7-227ENST00000548080 PLXNA4Q9HCM2 1894 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 LGALS16A8MUM7 142 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 DDHD2O94830 711 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 MAN2A1Q16706 1144 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 ZBTB41Q5SVQ8 909 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 ZPBP2Q6X784 338 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 FRMD5Q7Z6J6 570 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 C12orf56Q8IXR9 622 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 HACE1Q8IYU2 909 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 URGCPQ8TCY9 931 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 TMEM174Q8WUU8 243 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 ALG13Q9NP73 1137 aaKnown RBP18.87■□□□□ 0.61
HDAC7-227ENST00000548080 CACNG4Q9UBN1 327 aa18.87■□□□□ 0.61
HDAC7-227ENST00000548080 PES1O00541 588 aaKnown RBP18.86■□□□□ 0.61
HDAC7-227ENST00000548080 CLDN3O15551 220 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 PIGRP01833 764 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 MCF2P10911 925 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 UBXN1Q04323 297 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 GPM6BQ13491 265 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 HS1BP3Q53T59 392 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 GLRA4Q5JXX5 417 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 MICALL1Q8N3F8 863 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 KLHL23Q8NBE8 558 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 MRPL9Q9BYD2 267 aaKnown RBP18.86■□□□□ 0.61
HDAC7-227ENST00000548080 NRDE2Q9H7Z3 1164 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 METTL14Q9HCE5 456 aaKnown RBP18.86■□□□□ 0.61
HDAC7-227ENST00000548080 GIT1Q9Y2X7 761 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 CITO14578 2027 aa18.86■□□□□ 0.61
HDAC7-227ENST00000548080 ATG2AQ2TAZ0 1938 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 MEFVO15553 781 aaPredicted RBP18.85■□□□□ 0.61
HDAC7-227ENST00000548080 LPXNO60711 386 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 AKAP3O75969 853 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 EPB41P11171 864 aaKnown RBP18.85■□□□□ 0.61
HDAC7-227ENST00000548080 FOSL2P15408 326 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 PSMC2P35998 433 aaKnown RBP18.85■□□□□ 0.61
HDAC7-227ENST00000548080 PBX1P40424 430 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 TNFSF9P41273 254 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 GRM5P41594 1212 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 CYP2J2P51589 502 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 MCL1Q07820 350 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 VWA3BQ502W6 1294 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 MIIPQ5JXC2 388 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 CEP135Q66GS9 1140 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 TRIM59Q8IWR1 403 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 GSTCDQ8NEC7 633 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 ZSWIM2Q8NEG5 633 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 RABGGTAQ92696 567 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 RPS6KC1Q96S38 1066 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 GAS2L1Q99501 681 aaPredicted RBP18.85■□□□□ 0.61
HDAC7-227ENST00000548080 MKNK1Q9BUB5 465 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 UBN1Q9NPG3 1134 aa18.85■□□□□ 0.61
HDAC7-227ENST00000548080 ARMCX3Q9UH62 379 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms