RNA–Protein interactions for RNA: ENST00000547687.1

CHMP1A-204, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 1 (best)

Gene CHMP1A, Length 2,007 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-204ENST00000547687 MFSD10Q14728 455 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 NFRKBQ6P4R8 1299 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 Q7L0L9 218 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 ZSWIM2Q8NEG5 633 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 CAGE1Q8TC20 777 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 PRPF31Q8WWY3 499 aaKnown RBP17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 ZBTB10Q96DT7 871 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.87■□□□□ 0.455e-7■□□□□ 10.5
CHMP1A-204ENST00000547687 ARFGAP3Q9NP61 516 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 DNAJC12Q9UKB3 198 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 RAB21Q9UL25 225 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 MYO9BQ13459 2157 aa17.87■□□□□ 0.45
CHMP1A-204ENST00000547687 CCDC151A5D8V7 595 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 H0YCG3 227 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 KLRC1P26715 233 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 CAPSQ13938 189 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 HIC1Q14526 733 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 PTGISQ16647 500 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 LRIT3Q3SXY7 679 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 IER5Q5VY09 327 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 DEPTORQ8TB45 409 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 PNKPQ96T60 521 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 PACSIN1Q9BY11 444 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 GBF1Q92538 1859 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 TANC1Q9C0D5 1861 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 H3BRB1 525 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 MAPK13O15264 365 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 ATP8B1O43520 1251 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 GFPT2O94808 682 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 F2P00734 622 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 PNMA6AP0CW24 399 aaPredicted RBP17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 INSRRP14616 1297 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 SOX5P35711 763 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 DLG4P78352 724 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 SLC39A4Q6P5W5 647 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 VPS36Q86VN1 386 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 EXOC8Q8IYI6 725 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 RNPC3Q96LT9 517 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 TUT1Q9H6E5 874 aaKnown RBP17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 NAGPAQ9UK23 515 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 NOD1Q9Y239 953 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 DAAM1Q9Y4D1 1078 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 CHD7Q9P2D1 2997 aa17.86■□□□□ 0.45
CHMP1A-204ENST00000547687 HNRNPDLO14979 420 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 GAS2O43903 313 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 HOXD8P13378 290 aaPredicted RBP17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 TCP1P17987 556 aaKnown RBP17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 IGBP1P78318 339 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 DRAP1Q14919 205 aaPredicted RBP17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 KRT222Q8N1A0 295 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 TMEM199Q8N511 208 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 C7orf31Q8N865 590 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 TCP11Q8WWU5 503 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 OSBPL9Q96SU4 736 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 APEX2Q9UBZ4 518 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 USP20Q9Y2K6 914 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 HYOU1Q9Y4L1 999 aa17.85■□□□□ 0.45
CHMP1A-204ENST00000547687 BTNL10A8MVZ5 291 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 F8VZ95 297 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 K7ERI5 159 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 PDE2AO00408 941 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 N4BP1O75113 896 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 TUBBP07437 444 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 PDE4CQ08493 712 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 CETN1Q12798 172 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 ALKBH5Q6P6C2 394 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 ZNF365Q70YC5 407 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 CREG2Q8IUH2 290 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 PSPC1Q8WXF1 523 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 BICD1Q96G01 975 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 SIP14410 1827 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 UNC80Q8N2C7 3258 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 GOLGA8IPA6NC78 632 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 GOLGA8JA6NMD2 632 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 P4HA2O15460 535 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 NCK2O43639 380 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 PALMO75781 387 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 ABCD1P33897 745 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 PPP3CAQ08209 521 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 LAMTOR4Q0VGL1 99 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 STRN3Q13033 797 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 PPIGQ13427 754 aaKnown RBP eCLIP17.84■□□□□ 0.454e-13■■□□□ 12.1
CHMP1A-204ENST00000547687 ZNF484Q5JVG2 852 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 TMEM240Q5SV17 173 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 FAM109BQ6ICB4 259 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 EFCAB12Q6NXP0 572 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 DEFB128Q7Z7B8 93 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 METTL13Q8N6R0 699 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 LMO3Q8TAP4 145 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 COG1Q8WTW3 980 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 HNRNPLLQ8WVV9 542 aaKnown RBP17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 KCNN1Q92952 543 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 JPH2Q9BR39 696 aaPredicted RBP17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 TLR10Q9BXR5 811 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 SEZ6LQ9BYH1 1024 aa17.84■□□□□ 0.45
CHMP1A-204ENST00000547687 HAS3O00219 553 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 C22orf31O95567 290 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 SRGAP2CP0DJJ0 459 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 CLCN3P51790 818 aa17.83■□□□□ 0.45
CHMP1A-204ENST00000547687 MXD4Q14582 209 aaPredicted RBP17.83■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms