RNA–Protein interactions for RNA: ENST00000546810.1

RAB5B-203, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5B, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-203ENST00000546810 CNNM4Q6P4Q7 775 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 ECHDC2Q86YB7 292 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 C1orf210Q8IVY1 113 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 RNF169Q8NCN4 708 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 STAMQ92783 540 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 TRIM9Q9C026 710 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 TMEM134Q9H6X4 195 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 MINDY3Q9H8M7 445 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 AGPAT5Q9NUQ2 364 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 PANK4Q9NVE7 773 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 IRAK3Q9Y616 596 aa14.68□□□□□ -0.06
RAB5B-203ENST00000546810 ARID2Q68CP9 1835 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 WDR81Q562E7 1941 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 K7ENM7 598 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 ACKR2O00590 384 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 SLC16A4O15374 487 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 KINO60870 393 aaKnown RBP14.67□□□□□ -0.06
RAB5B-203ENST00000546810 PRKCBP05771 671 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 CTSAP10619 480 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 MAPTP10636 758 aaKnown RBP14.67□□□□□ -0.06
RAB5B-203ENST00000546810 LIG1P18858 919 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 NCKAP1LP55160 1127 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 BCAR1P56945 870 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 PRPF4BQ13523 1007 aaKnown RBP14.67□□□□□ -0.06
RAB5B-203ENST00000546810 FAM187BQ17R55 369 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 CLLU1OSQ5K130 101 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 TWF2Q6IBS0 349 aaKnown RBP14.67□□□□□ -0.06
RAB5B-203ENST00000546810 NOTUMQ6P988 496 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 PPP4R3CPQ6ZMV5 832 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 KRBA2Q6ZNG9 492 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 APBB1IPQ7Z5R6 666 aaPredicted RBP14.67□□□□□ -0.06
RAB5B-203ENST00000546810 PPFIBP1Q86W92 1011 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 RSAD2Q8WXG1 361 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 CCDC47Q96A33 483 aaKnown RBP14.67□□□□□ -0.06
RAB5B-203ENST00000546810 DNAJC19Q96DA6 116 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 CCDC51Q96ER9 411 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 PAGE5Q96GU1 130 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 KIFC3Q9BVG8 833 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 FZD8Q9H461 694 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 DLGAP2Q9P1A6 1054 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 ARHGAP28Q9P2N2 729 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 NCDNQ9UBB6 729 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 SIT1Q9Y3P8 196 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 DENND4AQ7Z401 1863 aa14.67□□□□□ -0.06
RAB5B-203ENST00000546810 TSPAN1O60635 241 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 RAB27AP51159 221 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 VARS2Q5ST30 1063 aaKnown RBP14.66□□□□□ -0.06
RAB5B-203ENST00000546810 PHLDB3Q6NSJ2 640 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 STXBP4Q6ZWJ1 553 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 HAUS6Q7Z4H7 955 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 FMR1NBQ8N0W7 255 aaPredicted RBP14.66□□□□□ -0.06
RAB5B-203ENST00000546810 GPR161Q8N6U8 529 aaKnown RBP14.66□□□□□ -0.06
RAB5B-203ENST00000546810 TMEM161BQ8NDZ6 487 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 HELQQ8TDG4 1101 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 TIGD1Q96MW7 591 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 MRPL9Q9BYD2 267 aaKnown RBP14.66□□□□□ -0.06
RAB5B-203ENST00000546810 CCDC113Q9H0I3 377 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 MRPL44Q9H9J2 332 aaKnown RBP14.66□□□□□ -0.06
RAB5B-203ENST00000546810 CNTNAP2Q9UHC6 1331 aa14.66□□□□□ -0.06
RAB5B-203ENST00000546810 FRYLO94915 3013 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.65□□□□□ -0.06
RAB5B-203ENST00000546810 PVALEFA0A1B0GWK0 134 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 FRMD3A2A2Y4 597 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 N4BP3O15049 544 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 GADD45BO75293 160 aaPredicted RBP14.65□□□□□ -0.06
RAB5B-203ENST00000546810 SRFP11831 508 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 ALCAMQ13740 583 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 AMHR2Q16671 573 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 C15orf39Q6ZRI6 1047 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 UNC13DQ70J99 1090 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 DDX53Q86TM3 631 aaKnown RBP14.65□□□□□ -0.06
RAB5B-203ENST00000546810 TMEM173Q86WV6 379 aaPredicted RBP14.65□□□□□ -0.06
RAB5B-203ENST00000546810 SFR1Q86XK3 245 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 HACE1Q8IYU2 909 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 SLC44A3Q8N4M1 653 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 ENGASEQ8NFI3 743 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 ADPGKQ9BRR6 497 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 TRAIPQ9BWF2 469 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 MRPL4Q9BYD3 311 aaKnown RBP14.65□□□□□ -0.06
RAB5B-203ENST00000546810 TRIM6Q9C030 488 aaPredicted RBP14.65□□□□□ -0.06
RAB5B-203ENST00000546810 BLZF1Q9H2G9 400 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 OLFML3Q9NRN5 406 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 CDV3Q9UKY7 258 aaKnown RBP14.65□□□□□ -0.06
RAB5B-203ENST00000546810 PCDHB13Q9Y5F0 798 aa14.65□□□□□ -0.06
RAB5B-203ENST00000546810 A0A0U1RQF3 1178 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 PRR5-ARHGAP8B1AHC4 643 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 N4BP1O75113 896 aaKnown RBP14.64□□□□□ -0.07
RAB5B-203ENST00000546810 ARF4P18085 180 aaPredicted RBP14.64□□□□□ -0.07
RAB5B-203ENST00000546810 GBP2P32456 591 aaPredicted RBP14.64□□□□□ -0.07
RAB5B-203ENST00000546810 ARHGAP8P85298 464 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 SNW1Q13573 536 aaKnown RBP14.64□□□□□ -0.07
RAB5B-203ENST00000546810 CUL4BQ13620 913 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 SLC27A1Q6PCB7 646 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 GRAMD1CQ8IYS0 662 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 GPR152Q8TDT2 470 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 KCNN1Q92952 543 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 HVCN1Q96D96 273 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 PGBD4Q96DM1 585 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 BICD1Q96G01 975 aa14.64□□□□□ -0.07
RAB5B-203ENST00000546810 CPB2Q96IY4 423 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms