RNA–Protein interactions for RNA: ENST00000546361.6

CHERP-203, Transcript of calcium homeostasis endoplasmic reticulum protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHERP, Length 4,173 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHERP-203ENST00000546361 C10orf67Q8IYJ2 551 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 A0A087WZ62 844 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 PPP1R3GB7ZBB8 358 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 TAF6P49848 677 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 Q4G0T1 1027 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 SPOPLQ6IQ16 392 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 PID1Q7Z2X4 250 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 TRPM4Q8TD43 1214 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 ATP8B4Q8TF62 1192 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 SEPT5Q99719 369 aaPredicted RBP12.54□□□□□ -0.4
CHERP-203ENST00000546361 EPAS1Q99814 870 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 FDXACB1Q9BRP7 624 aaPredicted RBP12.54□□□□□ -0.4
CHERP-203ENST00000546361 TRIM56Q9BRZ2 755 aaKnown RBP12.54□□□□□ -0.4
CHERP-203ENST00000546361 IRX2Q9BZI1 471 aaPredicted RBP12.54□□□□□ -0.4
CHERP-203ENST00000546361 BFARQ9NZS9 450 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 MOSPD1Q9UJG1 213 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 FARP1Q9Y4F1 1045 aaPredicted RBP12.54□□□□□ -0.4
CHERP-203ENST00000546361 FAM86B1E9PN63 330 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 PI4K2BG5E9Z4 385 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 GOLGA8MH3BSY2 632 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 CLGNO14967 610 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 FAM86B2P0C5J1 330 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 CA4P22748 312 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 YY1P25490 414 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 GNL1P36915 607 aaPredicted RBP12.54□□□□□ -0.4
CHERP-203ENST00000546361 RASSF2P50749 326 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 INHBEP58166 350 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 CUL1Q13616 776 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 DCP1BQ8IZD4 617 aaKnown RBP12.54□□□□□ -0.4
CHERP-203ENST00000546361 MORC4Q8TE76 937 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 SH3TC2Q8TF17 1288 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 MKL1Q969V6 931 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 OSMRQ99650 979 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 HDAC6Q9UBN7 1215 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 TRIM17Q9Y577 477 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
CHERP-203ENST00000546361 P4HA2O15460 535 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 STAG3L1P0CL83 205 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 PSMC6P62333 389 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 ZKSCAN8Q15776 578 aaPredicted RBP12.53□□□□□ -0.4
CHERP-203ENST00000546361 EARS2Q5JPH6 523 aaKnown RBP12.53□□□□□ -0.4
CHERP-203ENST00000546361 IFT43Q96FT9 208 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 MED15Q96RN5 788 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 DDX23Q9BUQ8 820 aaKnown RBP12.53□□□□□ -0.4
CHERP-203ENST00000546361 SP110Q9HB58 689 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 HMBSP08397 361 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 SKIP12755 728 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 RARRES1P49788 294 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 ALDH5A1P51649 535 aaPredicted RBP12.53□□□□□ -0.4
CHERP-203ENST00000546361 AP1B1Q10567 949 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 BFSP2Q13515 415 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 KIAA1755Q5JYT7 1200 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 F5H423 210 aaPredicted RBP12.53□□□□□ -0.4
CHERP-203ENST00000546361 C2CD2LO14523 706 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 ZNF286BP0CG31 522 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 ARHGAP25P42331 645 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 RBBP5Q15291 538 aaKnown RBP12.53□□□□□ -0.4
CHERP-203ENST00000546361 EMBQ6PCB8 327 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 TRPC7Q9HCX4 862 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 DDX56Q9NY93 547 aaKnown RBP12.53□□□□□ -0.4
CHERP-203ENST00000546361 UVRAGQ9P2Y5 699 aa12.53□□□□□ -0.4
CHERP-203ENST00000546361 ZNF142P52746 1687 aaPredicted RBP12.53□□□□□ -0.4
CHERP-203ENST00000546361 NKRFO15226 690 aaKnown RBP eCLIP12.52□□□□□ -0.4
CHERP-203ENST00000546361 KRT37O76014 449 aa12.52□□□□□ -0.4
CHERP-203ENST00000546361 CYP2C19P33261 490 aa12.52□□□□□ -0.4
CHERP-203ENST00000546361 CASP4P49662 377 aa12.52□□□□□ -0.4
CHERP-203ENST00000546361 KPNA2P52292 529 aaKnown RBP12.52□□□□□ -0.4
CHERP-203ENST00000546361 TTC19Q6DKK2 380 aaPredicted RBP12.52□□□□□ -0.4
CHERP-203ENST00000546361 GPAT2Q6NUI2 795 aa12.52□□□□□ -0.4
CHERP-203ENST00000546361 ASIC4Q96FT7 647 aa12.52□□□□□ -0.4
CHERP-203ENST00000546361 ABCF3Q9NUQ8 709 aa12.52□□□□□ -0.4
CHERP-203ENST00000546361 NOC2LQ9Y3T9 749 aaKnown RBP12.52□□□□□ -0.4
CHERP-203ENST00000546361 AKR1A1P14550 325 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 SERPINB6P35237 376 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 PNPLA4P41247 253 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 IRX4P78413 519 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 KRT17Q04695 432 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 GPS1Q13098 491 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 PPIL2Q13356 520 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 GLE1Q53GS7 698 aaKnown RBP12.52□□□□□ -0.41
CHERP-203ENST00000546361 ZNF720Q7Z2F6 126 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 C1orf54Q8WWF1 131 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 DHX38Q92620 1227 aaKnown RBP12.52□□□□□ -0.41
CHERP-203ENST00000546361 PDLIM2Q96JY6 352 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.52□□□□□ -0.419e-7■■□□□ 14.1
CHERP-203ENST00000546361 NOVA2Q9UNW9 492 aaKnown RBP12.52□□□□□ -0.41
CHERP-203ENST00000546361 KIF1AQ12756 1690 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 F8W8V4 182 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 GTF2H1P32780 548 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 GABPB1Q06547 395 aaPredicted RBP12.52□□□□□ -0.41
CHERP-203ENST00000546361 DCAF4L1Q3SXM0 396 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 PAN2Q504Q3 1202 aaKnown RBP12.52□□□□□ -0.41
CHERP-203ENST00000546361 KLHDC7AQ5VTJ3 777 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 OR6P1Q8NGX9 317 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 UBA3Q8TBC4 463 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 DEPDC1BQ8WUY9 529 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 RNPC3Q96LT9 517 aaKnown RBP12.52□□□□□ -0.41
CHERP-203ENST00000546361 VTA1Q9NP79 307 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 HPSEQ9Y251 543 aa12.52□□□□□ -0.41
CHERP-203ENST00000546361 ARHGAP42A6NI28 874 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms