RNA–Protein interactions for RNA: ENST00000546345.5

CCDC60-205, Transcript of coiled-coil domain containing 60, humanhuman

TSL 1 (best)

Gene CCDC60, Length 865 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-205ENST00000546345 KBTBD4Q9NVX7 518 aa7.65□□□□□ -1.18
CCDC60-205ENST00000546345 CHMP5Q9NZZ3 219 aa7.65□□□□□ -1.18
CCDC60-205ENST00000546345 DLGAP2Q9P1A6 1054 aa7.65□□□□□ -1.18
CCDC60-205ENST00000546345 KIAA1522Q9P206 1035 aaPredicted RBP7.65□□□□□ -1.18
CCDC60-205ENST00000546345 NR2E1Q9Y466 385 aa7.65□□□□□ -1.18
CCDC60-205ENST00000546345 HIDE1A8MVS5 230 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 ENPP3O14638 875 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 SCAMP3O14828 347 aaKnown RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 FOXP2O15409 715 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 RECKO95980 971 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 IGLV1-40P01703 118 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 LGALS2P05162 132 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 UBA1P22314 1058 aaKnown RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 TGM1P22735 817 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 MCM5P33992 734 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 TFAP4Q01664 338 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 APOBRQ0VD83 1088 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 LRFN4Q6PJG9 635 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 PDZRN4Q6ZMN7 1036 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 RUFY4Q6ZNE9 571 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 RTN4RL1Q86UN2 441 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 MAML2Q8IZL2 1156 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 ZDHHC14Q8IZN3 488 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 ZNF444Q8N0Y2 327 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 SYTL5Q8TDW5 730 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 DCAF4Q8WV16 495 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 LMBR1Q8WVP7 490 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 RNF34Q969K3 372 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 PLPPR2Q96GM1 343 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 RHOVQ96L33 236 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 NAP1L5Q96NT1 182 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 CDCA3Q99618 268 aaPredicted RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 BCAS3Q9H6U6 928 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 AGO3Q9H9G7 860 aaKnown RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 PCOLCE2Q9UKZ9 415 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 DUSP12Q9UNI6 340 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 TELO2Q9Y4R8 837 aa7.64□□□□□ -1.19
CCDC60-205ENST00000546345 ASH1LQ9NR48 2969 aaKnown RBP7.64□□□□□ -1.19
CCDC60-205ENST00000546345 EML5Q05BV3 1969 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 M0R2C6 588 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 FANCGO15287 622 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 GPAA1O43292 621 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 NARSO43776 548 aaKnown RBP7.63□□□□□ -1.19
CCDC60-205ENST00000546345 SP9P0CG40 484 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 ATP5JP18859 108 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 FANCCQ00597 558 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 SP2Q02086 613 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 UBE3AQ05086 875 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 RING1Q06587 406 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 FBXO47Q5MNV8 452 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 WIPI1Q5MNZ9 446 aaPredicted RBP7.63□□□□□ -1.19
CCDC60-205ENST00000546345 PLPP4Q5VZY2 271 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 ERC1Q8IUD2 1116 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 TDRD5Q8NAT2 981 aaKnown RBP7.63□□□□□ -1.19
CCDC60-205ENST00000546345 IL31RAQ8NI17 732 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 MPHOSPH6Q99547 160 aaKnown RBP7.63□□□□□ -1.19
CCDC60-205ENST00000546345 RTP3Q9BQQ7 232 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 SETD4Q9NVD3 440 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 STX8Q9UNK0 236 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 HCFC2Q9Y5Z7 792 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 MRVI1Q9Y6F6 885 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 MAST4O15021 2626 aa7.63□□□□□ -1.19
CCDC60-205ENST00000546345 MYH9P35579 1960 aaKnown RBP7.62□□□□□ -1.19
CCDC60-205ENST00000546345 PDCD11Q14690 1871 aaKnown RBP7.62□□□□□ -1.19
CCDC60-205ENST00000546345 CCDC171Q6TFL3 1326 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 FLNBO75369 2602 aaKnown RBP7.62□□□□□ -1.19
CCDC60-205ENST00000546345 LOC100996750A0A140TA64 210 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 PPFIA4O75335 1185 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 FGF18O76093 207 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 GGPS1O95749 300 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 PDHBP11177 359 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 GLULP15104 373 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 MCM4P33991 863 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 TDO2P48775 406 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 RBM25P49756 843 aaKnown RBP7.62□□□□□ -1.19
CCDC60-205ENST00000546345 RPL6Q02878 288 aaKnown RBP7.62□□□□□ -1.19
CCDC60-205ENST00000546345 FAM160A1Q05DH4 1040 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 CCDC173Q0VFZ6 552 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 USH1GQ495M9 461 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 SNAP47Q5SQN1 464 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 CELF3Q5SZQ8 465 aaKnown RBP7.62□□□□□ -1.19
CCDC60-205ENST00000546345 BNC2Q6ZN30 1099 aaPredicted RBP7.62□□□□□ -1.19
CCDC60-205ENST00000546345 CYFIP1Q7L576 1253 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 ISL2Q96A47 359 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 SPATA33Q96N06 139 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 KRTAP4-6Q9BYQ5 205 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 ADAM7Q9H2U9 754 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 CPVLQ9H3G5 476 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 PARD6AQ9NPB6 346 aa7.62□□□□□ -1.19
CCDC60-205ENST00000546345 PRAMEF27A3QJZ7 478 aa7.61□□□□□ -1.19
CCDC60-205ENST00000546345 BPNT1O95861 308 aa7.61□□□□□ -1.19
CCDC60-205ENST00000546345 XRCC6P12956 609 aaKnown RBP eCLIP7.61□□□□□ -1.19
CCDC60-205ENST00000546345 HOXB8P17481 243 aaPredicted RBP7.61□□□□□ -1.19
CCDC60-205ENST00000546345 CD52P31358 61 aa7.61□□□□□ -1.19
CCDC60-205ENST00000546345 EIF4A3P38919 411 aaKnown RBP7.61□□□□□ -1.19
CCDC60-205ENST00000546345 PPARAQ07869 468 aa7.61□□□□□ -1.19
CCDC60-205ENST00000546345 STXBP2Q15833 593 aa7.61□□□□□ -1.19
CCDC60-205ENST00000546345 ZBTB37Q5TC79 503 aa7.61□□□□□ -1.19
CCDC60-205ENST00000546345 KIAA1841Q6NSI8 718 aa7.61□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms