RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 SWSAP1Q6NVH7 229 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 CCDC124Q96CT7 223 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 NBPF3Q9H094 633 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 GOLGA8CPA6NN73 597 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 MGEA5O60502 916 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 TAC1P20366 129 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 KCNA3P22001 575 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 SSTR3P32745 418 aaPredicted RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 SERPINB4P48594 390 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 AP3M2P53677 418 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 BTNL9Q6UXG8 535 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 TRIM67Q6ZTA4 783 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 CATSPER3Q86XQ3 398 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 MTO1Q9Y2Z2 717 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 FAM205AQ6ZU69 1335 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 LRRC10BA6NIK2 292 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 ALDH18A1P54886 795 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 CDH6P55285 790 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 LMBRD2Q68DH5 695 aaPredicted RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 EEPD1Q7L9B9 569 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 ARHGEF1Q92888 912 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 MASTLQ96GX5 879 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 VPS39Q96JC1 886 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 TRPV6Q9H1D0 765 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 INTS13Q9NVM9 706 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 NUB1Q9Y5A7 615 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 ORC6Q9Y5N6 252 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 OATP04181 439 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 RARGP13631 454 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 CASP7P55210 303 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 MEA1Q16626 185 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 EARS2Q5JPH6 523 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 TEDDM1Q5T9Z0 273 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 HEATR6Q6AI08 1181 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 ARMCX2Q7L311 632 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 MSL3Q8N5Y2 521 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 OR6B3Q8NGW1 331 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 C18orf8Q96DM3 657 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 FAM167AQ96KS9 214 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 MOV10L1Q9BXT6 1211 aaKnown RBP12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 GTF3C4Q9UKN8 822 aa12.91□□□□□ -0.34
NPC1L1-204ENST00000546276 A0A0A6YYK5 440 aaPredicted RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 S100BP04271 92 aaPredicted RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 MCF2P10911 925 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 OSBPP22059 807 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 SKOR1P84550 965 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 IL1RL1Q01638 556 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 ZBTB17Q13105 803 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 ZNF568Q3ZCX4 644 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 RARS2Q5T160 578 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 NSUN6Q8TEA1 469 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 DHX38Q92620 1227 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 FAM217BQ9NTX9 383 aaPredicted RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 NYAP2Q9P242 653 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 DDX20Q9UHI6 824 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 MROH1Q8NDA8 1641 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 CUL3Q13618 768 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 ARL13BQ3SXY8 428 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 FAM102AQ5T9C2 384 aaPredicted RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 LVRNQ6Q4G3 990 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 SH3RF1Q7Z6J0 888 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 SUGP1Q8IWZ8 645 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 RPS6KC1Q96S38 1066 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 TLR10Q9BXR5 811 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 TCRBV5S4A2TA0A5A2 114 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 KIAA0391O15091 583 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 PYGBP11216 843 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 FGFR2P21802 821 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 TYK2P29597 1187 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 EEF1DP29692 281 aaKnown RBP12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 LDHDQ86WU2 507 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 CREG2Q8IUH2 290 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 PCDHA10Q9Y5I2 948 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC4A7Q9Y6M7 1214 aa12.9□□□□□ -0.34
NPC1L1-204ENST00000546276 SLC20A2Q08357 652 aa12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 DNAJC3Q13217 504 aa12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 MED21Q13503 144 aa12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 NBPF20Q3BBV1 942 aa12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 C1orf228Q6PIY5 440 aa12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 ZNF571Q7Z3V5 609 aaPredicted RBP12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 FBXO25Q8TCJ0 367 aa12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 ATP6V1E2Q96A05 226 aa12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 PCDHB2Q9Y5E7 798 aa12.9□□□□□ -0.35
NPC1L1-204ENST00000546276 DIP2BQ9P265 1576 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 ANP32DO95626 131 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 NDUFB10O96000 172 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 GHRP10912 638 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 BBS5Q8N3I7 341 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 ACAP3Q96P50 834 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 FAM118BQ9BPY3 351 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 LBHD1Q9BQE6 289 aaPredicted RBP12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 POLR3CQ9BUI4 534 aaPredicted RBP12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 ZNF302Q9NR11 478 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 SLC5A4Q9NY91 659 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 ZSCAN5CA6NGD5 496 aaPredicted RBP12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 F8VZ95 297 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 O00370 1275 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 GSTA4O15217 222 aa12.89□□□□□ -0.35
NPC1L1-204ENST00000546276 ERFP50548 548 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms