RNA–Protein interactions for RNA: ENST00000546274.6

UBR1-202, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 2 BASIC

Gene UBR1, Length 3,332 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-202ENST00000546274 CD97P48960 835 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 MTMR3Q13615 1198 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 KCTD1Q719H9 257 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 INTS8Q75QN2 995 aaKnown RBP8.38□□□□□ -1.07
UBR1-202ENST00000546274 OTUD6AQ7L8S5 288 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 GPBP1Q86WP2 473 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 OLIG1Q8TAK6 271 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 NAT14Q8WUY8 206 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 NRG4Q8WWG1 115 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 MBOAT7Q96N66 472 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 GOLPH3Q9H4A6 298 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 KLHL14Q9P2G3 628 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 CTNNAL1Q9UBT7 734 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 GGA1Q9UJY5 639 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 SMCHD1A6NHR9 2005 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L15C9J2P7 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L13C9JLJ4 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L11C9JVI0 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L18D6R9N7 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L22D6RA61 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L17D6RBQ6 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L19D6RCP7 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L20D6RJB6 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 CAPN9O14815 690 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 ASMTLO95671 621 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 SLC9A1P19634 815 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 RFC4P35249 363 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 NEK3P51956 506 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 PSMC6P62333 389 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 KLHL30Q0D2K2 578 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L24Q0WX57 530 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 EDRF1Q3B7T1 1238 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 CMPK2Q5EBM0 449 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 USP17L6PQ6QN14 398 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 EPM2AIP1Q7L775 607 aaPredicted RBP8.38□□□□□ -1.07
UBR1-202ENST00000546274 TREML1Q86YW5 311 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 CERS5Q8N5B7 392 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 NCSTNQ92542 709 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 SPATA17Q96L03 361 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 TBC1D10AQ9BXI6 508 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 DDX47Q9H0S4 455 aaKnown RBP8.38□□□□□ -1.07
UBR1-202ENST00000546274 PSTPIP2Q9H939 334 aa8.38□□□□□ -1.07
UBR1-202ENST00000546274 LARSQ9P2J5 1176 aaKnown RBP8.38□□□□□ -1.07
UBR1-202ENST00000546274 CYP3A7-CYP3A51PA0A087WV96 503 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 POTEFA5A3E0 1075 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 CES2O00748 559 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 PDE5AO76074 875 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 POTEIP0CG38 1075 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 CYP3A7P24462 503 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 COG7P83436 770 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 HERC4Q5GLZ8 1057 aaPredicted RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 POTEGQ6S5H5 508 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 POTEEQ6S8J3 1075 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 RFX8Q6ZV50 586 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 ERMNQ8TAM6 284 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 TLCD1Q96CP7 247 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 ERP27Q96DN0 273 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP8.37□□□□□ -1.07
UBR1-202ENST00000546274 ADAM7Q9H2U9 754 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 BCAS3Q9H6U6 928 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 DCLRE1BQ9H816 532 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 SIX2Q9NPC8 291 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 DOLKQ9UPQ8 538 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 TRAF3IP3Q9Y228 551 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 N6AMT1Q9Y5N5 214 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 KRT36O76013 467 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 GIT2Q14161 759 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 ASIC2Q16515 512 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 SHROOM1Q2M3G4 852 aaPredicted RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 TRAPPC3LQ5T215 181 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 TMEM214Q6NUQ4 689 aaKnown RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 TMC3Q7Z5M5 1100 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 CATSPER3Q86XQ3 398 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 STKLD1Q8NE28 680 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 ETNPPLQ8TBG4 499 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 SCFD2Q8WU76 684 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 PRPF31Q8WWY3 499 aaKnown RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 RPGRQ92834 1020 aaKnown RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 LUC7LQ9NQ29 371 aaKnown RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 TXLNGQ9NUQ3 528 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 HDAC9Q9UKV0 1011 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 TMED5Q9Y3A6 229 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 MYO3BQ8WXR4 1341 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 PITPNM2Q9BZ72 1349 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 SIGLEC16A6NMB1 481 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 MAP3K7O43318 606 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 STK10O94804 968 aaKnown RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 SPATA31C1P0DKV0 1188 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 NAT2P11245 290 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 UCHL3P15374 230 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 NR2F2P24468 414 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 PON1P27169 355 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 MMP13P45452 471 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 TUFMP49411 452 aaKnown RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 JAM2P57087 298 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 SULT2A1Q06520 285 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 KPNB1Q14974 876 aaKnown RBP8.37□□□□□ -1.07
UBR1-202ENST00000546274 ISLR2Q6UXK2 745 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 LENG9Q96B70 501 aa8.37□□□□□ -1.07
UBR1-202ENST00000546274 NDEL1Q9GZM8 345 aa8.37□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms