RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 APLFQ8IW19 511 aaPredicted RBP15.12■□□□□ 0.01
SRP54-202ENST00000546080 DCLK3Q9C098 648 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.12■□□□□ 0.011e-8■■■■■ 51.2
SRP54-202ENST00000546080 ZNF831Q5JPB2 1677 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 GNPATO15228 680 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 HOXA13P31271 388 aaPredicted RBP15.12■□□□□ 0.01
SRP54-202ENST00000546080 PTDSS1P48651 473 aaKnown RBP15.12■□□□□ 0.01
SRP54-202ENST00000546080 NR1H3Q13133 447 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 MYBPC2Q14324 1141 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 FAM71AQ8IYT1 594 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 CNBD1Q8NA66 436 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 BBOF1Q8ND07 529 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 ATL2Q8NHH9 583 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 SPOCK2Q92563 424 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 SLC7A6OSQ96CW6 309 aaPredicted RBP15.12■□□□□ 0.01
SRP54-202ENST00000546080 ACP6Q9NPH0 428 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 EURLQ9NYK6 297 aa15.12■□□□□ 0.01
SRP54-202ENST00000546080 LMNAP02545 664 aaKnown RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 PECAM1P16284 738 aaPredicted RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 KLC1Q07866 573 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 IKQ13123 557 aaPredicted RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 LBRQ14739 615 aaKnown RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 MUM1Q2TAK8 710 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 SYDE2Q5VT97 1194 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 IZUMO3Q5VZ72 239 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 SLC30A10Q6XR72 485 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 ZNF365Q70YC5 407 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 OTOP1Q7RTM1 612 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 PRUNE1Q86TP1 453 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 PPM1KQ8N3J5 372 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 TTC8Q8TAM2 541 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 LRRC8CQ8TDW0 803 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 SH3TC2Q8TF17 1288 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 DNAJC9Q8WXX5 260 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 SLCO1B3Q9NPD5 702 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 UBN1Q9NPG3 1134 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 CPSF2Q9P2I0 782 aaKnown RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 EXOC1LA0A1B0GW35 172 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 SPDYE5A6NIY4 337 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 K7ENM7 598 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 EDF1O60869 148 aaKnown RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 CBX6O95503 412 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 EEF2P13639 858 aaKnown RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 RRM1P23921 792 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 MAPK4P31152 587 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 GNPTABQ3T906 1256 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 RBM26Q5T8P6 1007 aaKnown RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 CYP4F22Q6NT55 531 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 TRABD2AQ86V40 505 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 MAML1Q92585 1016 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 RPGRQ92834 1020 aaKnown RBP15.11■□□□□ 0.01
SRP54-202ENST00000546080 LRRC4BQ9NT99 713 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 KCND2Q9NZV8 630 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 ANAPC7Q9UJX3 599 aa15.11■□□□□ 0.01
SRP54-202ENST00000546080 TAF1LQ8IZX4 1826 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 PRPF4O43172 522 aaKnown RBP eCLIP15.1■□□□□ 0.01
SRP54-202ENST00000546080 NPTXRO95502 500 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 CYP3A4P08684 503 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 ABHD2P08910 425 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 T-ENOLP0DO92 83 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 TAL1P17542 331 aaPredicted RBP15.1■□□□□ 0.01
SRP54-202ENST00000546080 MXI1P50539 228 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 TUBP50607 506 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 PAPOLAP51003 745 aaKnown RBP15.1■□□□□ 0.01
SRP54-202ENST00000546080 GTF2IP78347 998 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 PDK4Q16654 411 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 SGSM1Q2NKQ1 1148 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 TMEM154Q6P9G4 183 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 RGS9BPQ6ZS82 235 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 RELL1Q8IUW5 271 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 CCDC89Q8N998 374 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 SUPT20HQ8NEM7 779 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 C10orf82Q8WW14 230 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 CCDC17Q96LX7 622 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 NACC1Q96RE7 527 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 PAPOLBQ9NRJ5 636 aaKnown RBP15.1■□□□□ 0.01
SRP54-202ENST00000546080 ETAA1Q9NY74 926 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 RPL26L1Q9UNX3 145 aaKnown RBP15.1■□□□□ 0.01
SRP54-202ENST00000546080 USP20Q9Y2K6 914 aa15.1■□□□□ 0.01
SRP54-202ENST00000546080 GREB1LQ9C091 1923 aaPredicted RBP15.1■□□□□ 0.01
SRP54-202ENST00000546080 IGLV3-22A0A075B6J6 115 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 KLHL33A6NCF5 533 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 ENTPD5O75356 428 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 SLURP2P0DP57 97 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 GNAT1P11488 350 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 MAGEA4P43358 317 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 PRELPP51888 382 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 MFAP3P55082 362 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 CENPCQ03188 943 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 TAF1BQ53T94 588 aaPredicted RBP15.09■□□□□ 0.01
SRP54-202ENST00000546080 CEP128Q6ZU80 1094 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 EGFL6Q8IUX8 553 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 RBBP8NLQ8NC74 664 aaPredicted RBP15.09■□□□□ 0.01
SRP54-202ENST00000546080 TEKT4Q8WW24 435 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 CFAP57Q96MR6 1250 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 KREMEN1Q96MU8 473 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 HERPUD2Q9BSE4 406 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 DENND2DQ9H6A0 471 aaPredicted RBP15.09■□□□□ 0.01
SRP54-202ENST00000546080 DCLRE1BQ9H816 532 aa15.09■□□□□ 0.01
SRP54-202ENST00000546080 R3HDM2Q9Y2K5 976 aaKnown RBP15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms