RNA–Protein interactions for RNA: ENST00000545831.5

NPIPA1-208, Transcript of nuclear pore complex interacting protein family member A1, human

TSL 3

Gene NPIPA1, Length 553 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NPIPA1-208	ENST00000545831	RGS18	Q9NS28	235 aa		10.85	□□□□□ -0.67
NPIPA1-208	ENST00000545831	RAB20	Q9NX57	234 aa		10.85	□□□□□ -0.67
NPIPA1-208	ENST00000545831	LUC7L2	Q9Y383	392 aa	Known RBP	10.85	□□□□□ -0.67
NPIPA1-208	ENST00000545831	COQ4	Q9Y3A0	265 aa		10.85	□□□□□ -0.67
NPIPA1-208	ENST00000545831	C2CD2	Q9Y426	696 aa		10.85	□□□□□ -0.67
NPIPA1-208	ENST00000545831		A0A0U1RQF3	1178 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831		A0A1W2PQJ5	194 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	MGEA5	O60502	916 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	RAG1	P15918	1043 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	SLC9A1	P19634	815 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	AKAP5	P24588	427 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CASP14	P31944	242 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	KLK7	P49862	253 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	ZBED6	P86452	979 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PLEKHG4	Q58EX7	1191 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	KLHDC7A	Q5VTJ3	777 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TRIM65	Q6PJ69	517 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	C15orf39	Q6ZRI6	1047 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	TRAPPC11	Q7Z392	1133 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	ECHDC2	Q86YB7	292 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CNGA4	Q8IV77	575 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	BEST2	Q8NFU1	509 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	OR5B17	Q8NGF7	314 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	SCLY	Q96I15	445 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	FAM81B	Q96LP2	452 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	NT5C1B	Q96P26	610 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	RPS6KC1	Q96S38	1066 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	NUCKS1	Q9H1E3	243 aa	Known RBP	10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CEP72	Q9P209	647 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CNTN3	Q9P232	1028 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	PRKAG2	Q9UGJ0	569 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	CAPN11	Q9UMQ6	739 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	GIT1	Q9Y2X7	761 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	GTF3C5	Q9Y5Q8	519 aa	Predicted RBP	10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831	UMODL1	Q5DID0	1318 aa		10.84	□□□□□ -0.67
NPIPA1-208	ENST00000545831		C9IYK1	514 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	KIAA0355	O15063	1070 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	CLSTN1	O94985	981 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	EOMES	O95936	686 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TIMP1	P01033	207 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	HLA-DRA	P01903	254 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	CXCL10	P02778	98 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GYPC	P04921	128 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	NFIC	P08651	508 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ACTN1	P12814	892 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	KCNE1	P15382	129 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RFX1	P22670	979 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	KRT9	P35527	623 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	POLR2F	P61218	127 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	NCOA4	Q13772	614 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	XKR4	Q5GH76	650 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TDRD10	Q5VZ19	366 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ALKAL1	Q6UXT8	129 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	DEFB128	Q7Z7B8	93 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	UBE2Q1	Q7Z7E8	422 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	EFCAB13	Q8IY85	973 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RPUSD2	Q8IZ73	545 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TMEM199	Q8N511	208 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RNF169	Q8NCN4	708 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	LMO3	Q8TAP4	145 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TAS1R2	Q8TE23	839 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	SPAG5	Q96R06	1193 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MTMR12	Q9C0I1	747 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	WNT8A	Q9H1J5	351 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TSPYL2	Q9H2G4	693 aa	Predicted RBP	10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ZNHIT6	Q9NWK9	470 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	KLK14	Q9P0G3	267 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	FBXL5	Q9UKA1	691 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	UBQLN1	Q9UMX0	589 aa	Known RBP	10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	PTPRJ	Q12913	1337 aa		10.83	□□□□□ -0.68
NPIPA1-208	ENST00000545831	SMIM28	A0A1B0GU29	152 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ENPP3	O14638	875 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MFAP3L	O75121	409 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	KRT19	P08727	400 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	UCHL3	P15374	230 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	IBSP	P21815	317 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ATIC	P31939	592 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	FXR1	P51114	621 aa	Known RBP eCLIP	10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	MFAP3	P55082	362 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ADK	P55263	362 aa	Known RBP	10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	FAM189B	P81408	668 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RBP5	P82980	135 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	LRMP	Q12912	555 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	IKBKE	Q14164	716 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GPNMB	Q14956	572 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	SGSM1	Q2NKQ1	1148 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	CNKSR3	Q6P9H4	555 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RRAGA	Q7L523	313 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RTN4RL1	Q86UN2	441 aa	Predicted RBP	10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	FMNL3	Q8IVF7	1028 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	OR8K1	Q8NGG5	319 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TAF4B	Q92750	862 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	SEMA4D	Q92854	862 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	HTATIP2	Q9BUP3	242 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	TTYH3	Q9C0H2	523 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	GAN	Q9H2C0	597 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	ELAC1	Q9H777	363 aa	Known RBP	10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	RSAD1	Q9HA92	442 aa		10.82	□□□□□ -0.68
NPIPA1-208	ENST00000545831	SIX2	Q9NPC8	291 aa		10.82	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms