RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 NT5C1BQ96P26 610 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 DNAJC7Q99615 494 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 BAG1Q99933 345 aaPredicted RBP14.88□□□□□ -0.03
SCARB1-209ENST00000545305 MTMR12Q9C0I1 747 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 KCNF1Q9H3M0 494 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 SIX2Q9NPC8 291 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 C1orf112Q9NSG2 853 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 PARP2Q9UGN5 583 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 DERAQ9Y315 318 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 IPPQ9Y573 584 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 FHOD1Q9Y613 1164 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 ANK1P16157 1881 aa14.88□□□□□ -0.03
SCARB1-209ENST00000545305 CITO14578 2027 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 RECQL4O94761 1208 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 NFICP08651 508 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 SKIP12755 728 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 SKILP12757 684 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 CCZ1BP86790 482 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 CCZ1P86791 482 aaPredicted RBP14.87□□□□□ -0.03
SCARB1-209ENST00000545305 APBA1Q02410 837 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 TRPC3Q13507 836 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 SLC10A6Q3KNW5 377 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 JADE1Q6IE81 842 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 TRAF7Q6Q0C0 670 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 EFCAB13Q8IY85 973 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 LMO3Q8TAP4 145 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 BAP1Q92560 729 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 KIF12Q96FN5 646 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 FAM81BQ96LP2 452 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 TSPAN18Q96SJ8 248 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 IFIH1Q9BYX4 1025 aaKnown RBP14.87□□□□□ -0.03
SCARB1-209ENST00000545305 MCOLN1Q9GZU1 580 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 FAM105AQ9NUU6 356 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 MYO6Q9UM54 1294 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 ATP11BQ9Y2G3 1177 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 ZKSCAN5Q9Y2L8 839 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 R3HCC1Q9Y3T6 440 aaKnown RBP14.87□□□□□ -0.03
SCARB1-209ENST00000545305 C2CD2Q9Y426 696 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 HES2Q9Y543 173 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 PCDHB2Q9Y5E7 798 aa14.87□□□□□ -0.03
SCARB1-209ENST00000545305 LRRC53A6NM62 1247 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 RNF225M0QZC1 329 aaPredicted RBP14.86□□□□□ -0.03
SCARB1-209ENST00000545305 XPOTO43592 962 aaKnown RBP14.86□□□□□ -0.03
SCARB1-209ENST00000545305 PARNO95453 639 aaKnown RBP14.86□□□□□ -0.03
SCARB1-209ENST00000545305 ITGA4P13612 1032 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 MFAP3P55082 362 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 TLE2Q04725 743 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 NCOA4Q13772 614 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 SFMBT2Q5VUG0 894 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 IQCEQ6IPM2 695 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 CYP26C1Q6V0L0 522 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 FAM43BQ6ZT52 329 aaPredicted RBP14.86□□□□□ -0.03
SCARB1-209ENST00000545305 TRAPPC11Q7Z392 1133 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 NECAB2Q7Z6G3 386 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 SEMA4DQ92854 862 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 FAM84AQ96KN4 292 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 HIPK3Q9H422 1215 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 DNAJC12Q9UKB3 198 aa14.86□□□□□ -0.03
SCARB1-209ENST00000545305 TANC1Q9C0D5 1861 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 ARHGAP6O43182 974 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 VNN1O95497 513 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 FECHP22830 423 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 AKAP5P24588 427 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 MSNP26038 577 aaKnown RBP14.85□□□□□ -0.03
SCARB1-209ENST00000545305 STAT1P42224 750 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 DSC3Q14574 896 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 ASIC2Q16515 512 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 DPY19L2P1Q6NXN4 242 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 GJB7Q6PEY0 223 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 ENOSF1Q7L5Y1 443 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 ZSCAN30Q86W11 494 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 TMTC1Q8IUR5 882 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 ARHGEF19Q8IW93 802 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 PPM1KQ8N3J5 372 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 SMG8Q8ND04 991 aaKnown RBP14.85□□□□□ -0.03
SCARB1-209ENST00000545305 BEST2Q8NFU1 509 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 SYN2Q92777 582 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-209ENST00000545305 PGBD4Q96DM1 585 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 PAWRQ96IZ0 340 aaKnown RBP14.85□□□□□ -0.03
SCARB1-209ENST00000545305 ADAM2Q99965 735 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 TRAIPQ9BWF2 469 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 FTHL17Q9BXU8 183 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 STK33Q9BYT3 514 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 TMX1Q9H3N1 280 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 UBE2TQ9NPD8 197 aaPredicted RBP14.85□□□□□ -0.03
SCARB1-209ENST00000545305 CNTN3Q9P232 1028 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 ITGA11Q9UKX5 1188 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 CENPFP49454 3210 aa14.85□□□□□ -0.03
SCARB1-209ENST00000545305 MEFVO15553 781 aaPredicted RBP14.84□□□□□ -0.03
SCARB1-209ENST00000545305 MGEA5O60502 916 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 KRT19P08727 400 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 HNRNPH3P31942 346 aaKnown RBP14.84□□□□□ -0.03
SCARB1-209ENST00000545305 NOP14P78316 857 aaKnown RBP14.84□□□□□ -0.03
SCARB1-209ENST00000545305 FAAP100Q0VG06 881 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 MBTPS1Q14703 1052 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 MEA1Q16626 185 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 ZNF699Q32M78 642 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 PHLDB3Q6NSJ2 640 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 SEPT8Q92599 483 aa14.84□□□□□ -0.03
SCARB1-209ENST00000545305 RPS6KC1Q96S38 1066 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms