RNA–Protein interactions for RNA: ENST00000544363.5

CCM2-219, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,620 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-219ENST00000544363 CCDC170Q8IYT3 715 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 EPN1Q9Y6I3 576 aaPredicted RBP32.84■■■□□ 2.85
CCM2-219ENST00000544363 F8VZ95 297 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 SERPING1P05155 500 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 TMEM191BP0C7N4 346 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 TFAMQ00059 246 aaKnown RBP32.84■■■□□ 2.85
CCM2-219ENST00000544363 UBXN11Q5T124 520 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 GPIHBP1Q8IV16 184 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 ANKRD36BP1Q96IX9 119 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 GPR88Q9GZN0 384 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 RRAGDQ9NQL2 400 aaPredicted RBP32.84■■■□□ 2.85
CCM2-219ENST00000544363 UTP3Q9NQZ2 479 aaKnown RBP eCLIP32.84■■■□□ 2.851e-6■■■■■ 98.5
CCM2-219ENST00000544363 SNTG2Q9NY99 539 aa32.84■■■□□ 2.85
CCM2-219ENST00000544363 TNNC2P02585 160 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 CDK7P50613 346 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 ARHGAP44Q17R89 818 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 WDR44Q5JSH3 913 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 IRF2BP2Q7Z5L9 587 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 CD302Q8IX05 232 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 PPM1KQ8N3J5 372 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 HELQQ8TDG4 1101 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 PI4K2AQ9BTU6 479 aa32.83■■■□□ 2.85
CCM2-219ENST00000544363 TRMT1Q9NXH9 659 aaKnown RBP32.83■■■□□ 2.85
CCM2-219ENST00000544363 USP27XA6NNY8 438 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 GPR182O15218 404 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 CCP110O43303 1012 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 NDUFA10O95299 355 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 PLEKP08567 350 aaPredicted RBP32.82■■■□□ 2.84
CCM2-219ENST00000544363 SOX5P35711 763 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 NCOA4Q13772 614 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 FBXO47Q5MNV8 452 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 JADE1Q6IE81 842 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 FMNL3Q8IVF7 1028 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 DESI2Q9BSY9 194 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 CHST12Q9NRB3 414 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 PPP2R2CQ9Y2T4 447 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 ADGRG1Q9Y653 693 aa32.82■■■□□ 2.84
CCM2-219ENST00000544363 NFICP08651 508 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 CYLC1P35663 651 aaPredicted RBP32.81■■■□□ 2.84
CCM2-219ENST00000544363 MFAP3P55082 362 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 ARID5AQ03989 594 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 NFX1Q12986 1120 aaKnown RBP32.81■■■□□ 2.84
CCM2-219ENST00000544363 MAPK8IP2Q13387 824 aaPredicted RBP32.81■■■□□ 2.84
CCM2-219ENST00000544363 ZNF618Q5T7W0 954 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 TATDN2Q93075 761 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 ZNF333Q96JL9 665 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 CCDC42Q96M95 316 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 PLEKHA5Q9HAU0 1116 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 DNAH12Q6ZR08 3092 aa32.81■■■□□ 2.84
CCM2-219ENST00000544363 SSU72P8A0A1W2PR75 194 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 ZSCAN12O43309 604 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 FERP16591 822 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 EIF4A3P38919 411 aaKnown RBP32.8■■■□□ 2.84
CCM2-219ENST00000544363 TDRD12Q587J7 1177 aaKnown RBP32.8■■■□□ 2.84
CCM2-219ENST00000544363 FAM81BQ96LP2 452 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 NXF3Q9H4D5 531 aaKnown RBP32.8■■■□□ 2.84
CCM2-219ENST00000544363 AGO3Q9H9G7 860 aaKnown RBP32.8■■■□□ 2.84
CCM2-219ENST00000544363 C1orf112Q9NSG2 853 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 CCDC175P0C221 793 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 CKBP12277 381 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 YARSP54577 528 aaKnown RBP32.8■■■□□ 2.84
CCM2-219ENST00000544363 KLHL30Q0D2K2 578 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 TWF2Q6IBS0 349 aaKnown RBP32.8■■■□□ 2.84
CCM2-219ENST00000544363 NT5DC4Q86YG4 428 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 KAT5Q92993 513 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 KREMEN1Q96MU8 473 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 CRISPLD2Q9H0B8 497 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 HES2Q9Y543 173 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 BZW2Q9Y6E2 419 aaKnown RBP32.8■■■□□ 2.84
CCM2-219ENST00000544363 SQORQ9Y6N5 450 aa32.8■■■□□ 2.84
CCM2-219ENST00000544363 CITO14578 2027 aa32.79■■■□□ 2.84
CCM2-219ENST00000544363 CST3P01034 146 aaPredicted RBP32.79■■■□□ 2.84
CCM2-219ENST00000544363 PNMA6AP0CW24 399 aaPredicted RBP32.79■■■□□ 2.84
CCM2-219ENST00000544363 PRKCIP41743 596 aa32.79■■■□□ 2.84
CCM2-219ENST00000544363 LBX1P52954 281 aa32.79■■■□□ 2.84
CCM2-219ENST00000544363 GCNT1Q02742 428 aa32.79■■■□□ 2.84
CCM2-219ENST00000544363 PKN2Q16513 984 aaKnown RBP32.79■■■□□ 2.84
CCM2-219ENST00000544363 SNX27Q96L92 541 aa32.79■■■□□ 2.84
CCM2-219ENST00000544363 ERVK-5Q9HDB9 667 aa32.79■■■□□ 2.84
CCM2-219ENST00000544363 C2CD2Q9Y426 696 aa32.79■■■□□ 2.84
CCM2-219ENST00000544363 FOXN3O00409 490 aaPredicted RBP32.78■■■□□ 2.84
CCM2-219ENST00000544363 GFPT2O94808 682 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 GHRP10912 638 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 LPIN1Q14693 890 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 TMEM132DQ14C87 1099 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 ENOSF1Q7L5Y1 443 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 ELMO3Q96BJ8 720 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 PPP1R13BQ96KQ4 1090 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 OSBPL7Q9BZF2 842 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 DEF6Q9H4E7 631 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 PADI3Q9ULW8 664 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 BRCA2P51587 3418 aa32.78■■■□□ 2.84
CCM2-219ENST00000544363 EIF3CLB5ME19 914 aaKnown RBP32.77■■■□□ 2.84
CCM2-219ENST00000544363 RBAK-RBAKDNI3L0D1 243 aa32.77■■■□□ 2.84
CCM2-219ENST00000544363 TRPC3Q13507 836 aa32.77■■■□□ 2.84
CCM2-219ENST00000544363 USP38Q8NB14 1042 aa32.77■■■□□ 2.84
CCM2-219ENST00000544363 ACRBPQ8NEB7 543 aa32.77■■■□□ 2.84
CCM2-219ENST00000544363 EIF3CQ99613 913 aaKnown RBP32.77■■■□□ 2.84
CCM2-219ENST00000544363 IMPG2Q9BZV3 1241 aa32.77■■■□□ 2.84
CCM2-219ENST00000544363 HAUS4Q9H6D7 363 aa32.77■■■□□ 2.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms