RNA–Protein interactions for RNA: ENST00000544327.1

SCARB1-208, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 1,812 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-208ENST00000544327 CCDC137Q6PK04 289 aaKnown RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 CRELD2Q6UXH1 353 aaPredicted RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 CYFIP1Q7L576 1253 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 ASAP3Q8TDY4 903 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 FNBP1Q96RU3 617 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 PI4K2AQ9BTU6 479 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 PABPC3Q9H361 631 aaKnown RBP18.97■□□□□ 0.63
SCARB1-208ENST00000544327 TMEM134Q9H6X4 195 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 SLC12A6Q9UHW9 1150 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 SNX24Q9Y343 169 aa18.97■□□□□ 0.63
SCARB1-208ENST00000544327 FSCN2O14926 492 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 LDHAP00338 332 aaKnown RBP18.96■□□□□ 0.63
SCARB1-208ENST00000544327 RARAP10276 462 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 RFC5P40937 340 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 NLRP11P59045 1033 aaKnown RBP18.96■□□□□ 0.63
SCARB1-208ENST00000544327 SP4Q02446 784 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 CENPCQ03188 943 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 PRAMEF18Q5VWM3 479 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 TRIM72Q6ZMU5 477 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 SPATS2Q86XZ4 545 aaKnown RBP18.96■□□□□ 0.63
SCARB1-208ENST00000544327 CPNE8Q86YQ8 564 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 TLCD1Q96CP7 247 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 CNTN6Q9UQ52 1028 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 ATP8A1Q9Y2Q0 1164 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 CD2APQ9Y5K6 639 aa18.96■□□□□ 0.63
SCARB1-208ENST00000544327 ACO1P21399 889 aaKnown RBP18.95■□□□□ 0.62
SCARB1-208ENST00000544327 RPL21P46778 160 aaKnown RBP18.95■□□□□ 0.62
SCARB1-208ENST00000544327 PMS2P54278 862 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 PTP4A2Q12974 167 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 B4GALNT4Q76KP1 1039 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 HOOK3Q86VS8 718 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.95■□□□□ 0.62
SCARB1-208ENST00000544327 DEPTORQ8TB45 409 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 FBXO25Q8TCJ0 367 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 TRPM4Q8TD43 1214 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 ZNF526Q8TF50 670 aaPredicted RBP18.95■□□□□ 0.62
SCARB1-208ENST00000544327 CGRRF1Q99675 332 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 HAPLN2Q9GZV7 340 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 A0A0B4J269 797 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 NDUFAB1O14561 156 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 VNN1O95497 513 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 PAEPP09466 180 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 MAPK4P31152 587 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 PIK3CAP42336 1068 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 WNT7BP56706 349 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 PPP2R2AP63151 447 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 TARBP2Q15633 366 aaKnown RBP18.95■□□□□ 0.62
SCARB1-208ENST00000544327 SMYD5Q6GMV2 418 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 PPP1R2P3Q6NXS1 205 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 C3orf20Q8ND61 904 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 MAIP1Q8WWC4 291 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 TMEM143Q96AN5 459 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 MTRF1LQ9UGC7 380 aaKnown RBP18.95■□□□□ 0.62
SCARB1-208ENST00000544327 FBXO40Q9UH90 709 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 ANAPC7Q9UJX3 599 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 FZD1Q9UP38 647 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 PPME1Q9Y570 386 aa18.95■□□□□ 0.62
SCARB1-208ENST00000544327 MROH7Q68CQ1 1323 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 ADGRA2Q96PE1 1338 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 PAPPA2Q9BXP8 1791 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 TCRBV7S2A1N4TA0A589 114 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 TNNI1P19237 187 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 EDNRBP24530 442 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 MAGEA9P43362 315 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 ALDH5A1P51649 535 aaPredicted RBP18.94■□□□□ 0.62
SCARB1-208ENST00000544327 PLTPP55058 493 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 CUL2Q13617 745 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 KRT71Q3SY84 523 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 LBX2Q6XYB7 198 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 MON1BQ7L1V2 547 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 CROCCP2Q86T23 111 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 SLC7A3Q8WY07 619 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 ART4Q93070 314 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 TMEM109Q9BVC6 243 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 RASSF4Q9H2L5 321 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 RBAKQ9NYW8 714 aaPredicted RBP18.94■□□□□ 0.62
SCARB1-208ENST00000544327 GPRC5DQ9NZD1 345 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 PASKQ96RG2 1323 aa18.94■□□□□ 0.62
SCARB1-208ENST00000544327 PTPRFP10586 1907 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 K7ERI5 159 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 RIOX2Q8IUF8 465 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 VCPIP1Q96JH7 1222 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 CENPHQ9H3R5 247 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 GGA3Q9NZ52 723 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 GGA2Q9UJY4 613 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 PTPRJQ12913 1337 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 LRRC37A2A6NM11 1700 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 GSTTP1A0A1W2PQM5 241 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 TRIM66O15016 1216 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 TBXAS1P24557 533 aaPredicted RBP18.93■□□□□ 0.62
SCARB1-208ENST00000544327 HPDP32754 393 aaPredicted RBP18.93■□□□□ 0.62
SCARB1-208ENST00000544327 ACOT2P49753 483 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 SLMAPQ14BN4 828 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 SYDE1Q6ZW31 735 aaPredicted RBP18.93■□□□□ 0.62
SCARB1-208ENST00000544327 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.93■□□□□ 0.62
SCARB1-208ENST00000544327 ELMO3Q96BJ8 720 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 PCYT2Q99447 389 aa18.93■□□□□ 0.62
SCARB1-208ENST00000544327 APOBEC3GQ9HC16 384 aaKnown RBP18.93■□□□□ 0.62
SCARB1-208ENST00000544327 NOVA2Q9UNW9 492 aaKnown RBP18.93■□□□□ 0.62
SCARB1-208ENST00000544327 CNTNAP2Q9UHC6 1331 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms