RNA–Protein interactions for RNA: ENST00000543469.1

TRIM59-208, Transcript of tripartite motif containing 59, humanhuman

TSL 5 BASIC

Gene TRIM59, Length 4,615 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM59-208ENST00000543469 ATP1A3P13637 1013 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 TCP1P17987 556 aaKnown RBP8.55□□□□□ -1.04
TRIM59-208ENST00000543469 MAN1A1P33908 653 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 LRMPQ12912 555 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 SNX17Q15036 470 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 TRIM50Q86XT4 487 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 LRRC52Q8N7C0 313 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 PTPN22Q9Y2R2 807 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 TRPM7Q96QT4 1865 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 LSM8O95777 96 aaKnown RBP8.55□□□□□ -1.04
TRIM59-208ENST00000543469 EOMESO95936 686 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 VTNP04004 478 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 KIZQ2M2Z5 673 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 PRAMEF19Q5SWL8 479 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 KLHDC7AQ5VTJ3 777 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 DPH6Q7L8W6 267 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 ARHGAP18Q8N392 663 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 GCNAQ96QF7 691 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 CRACR2AQ9BSW2 395 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 FZD8Q9H461 694 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 SIPA1L1O43166 1804 aa8.55□□□□□ -1.04
TRIM59-208ENST00000543469 SPOPO43791 374 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 ZNF862O60290 1169 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 RNF8O76064 485 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 CD44P16070 742 aaKnown RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 ELF1P32519 619 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 SMARCB1Q12824 385 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 DRAP1Q14919 205 aaPredicted RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 MAP7D3Q8IWC1 876 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 ELMOD1Q8N336 334 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 TMEM174Q8WUU8 243 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 USP6NLQ92738 828 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 C11orf49Q9H6J7 331 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 GJD2Q9UKL4 321 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 AGAP1Q9UPQ3 857 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 A0A087WWV3 80 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 MIF4GDA9UHW6 222 aaKnown RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 B4GALT4O60513 344 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 CTSHP09668 335 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 SRGAP2BP0DMP2 458 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 CCL5P13501 91 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 ELNP15502 786 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 RAG1P15918 1043 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 NOP14P78316 857 aaKnown RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 UNC93AQ86WB7 457 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 CNPY4Q8N129 248 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 OSMRQ99650 979 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 DUSP9Q99956 384 aaKnown RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 RNPEPQ9H4A4 650 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 NHEJ1Q9H9Q4 299 aaPredicted RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 LRRC4Q9HBW1 653 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 NXF1Q9UBU9 619 aaKnown RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 SLC12A6Q9UHW9 1150 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 PHF24Q9UPV7 400 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 GNEQ9Y223 722 aaKnown RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 PPP2R2CQ9Y2T4 447 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 ASTN1O14525 1302 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 URI1O94763 535 aaPredicted RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 PGK1P00558 417 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 PAEPP09466 180 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 UCHL3P15374 230 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 GBP1P32455 592 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 OSTNP61366 133 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 KRT17Q04695 432 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 EHHADHQ08426 723 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 GRIK3Q13003 919 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 NCAPHQ15003 741 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 ECM1Q16610 540 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 RPAINQ86UA6 219 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 OR6B3Q8NGW1 331 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 UBXN4Q92575 508 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 HEXIM2Q96MH2 286 aaKnown RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 ZNF830Q96NB3 372 aaPredicted RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 RUFY1Q96T51 708 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 NT5C1AQ9BXI3 368 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 MAK16Q9BXY0 300 aaKnown RBP8.54□□□□□ -1.04
TRIM59-208ENST00000543469 HOMER3Q9NSC5 361 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 GUCA1BQ9UMX6 200 aa8.54□□□□□ -1.04
TRIM59-208ENST00000543469 A0A0B4J269 797 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 IGKV6-21A0A0C4DH24 114 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 CTAGE15A4D2H0 777 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 NDUFA10O95299 355 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 CTAGE8P0CG41 777 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 ADKP55263 362 aaKnown RBP8.53□□□□□ -1.04
TRIM59-208ENST00000543469 C1QTNF8P60827 252 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 PLD1Q13393 1074 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 RPS6KA1Q15418 735 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 CTAGE6Q86UF2 777 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 CTAGE4Q8IX94 777 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 PARD3BQ8TEW8 1205 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 DEFB118Q96PH6 123 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 RSAD1Q9HA92 442 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 STIM2Q9P246 746 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 RBBP6Q7Z6E9 1792 aaKnown RBP8.53□□□□□ -1.04
TRIM59-208ENST00000543469 STK10O94804 968 aaKnown RBP8.53□□□□□ -1.04
TRIM59-208ENST00000543469 CA8P35219 290 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 ACOT2P49753 483 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 CUL2Q13617 745 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 WHAMMP3Q1A5X7 153 aa8.53□□□□□ -1.04
TRIM59-208ENST00000543469 DNAJC24Q6P3W2 148 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 339.8 ms