RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 TTLL12Q14166 644 aaPredicted RBP12□□□□□ -0.49
CDH4-201ENST00000543233 RRP1BQ14684 758 aaKnown RBP12□□□□□ -0.49
CDH4-201ENST00000543233 CMPK2Q5EBM0 449 aa12□□□□□ -0.49
CDH4-201ENST00000543233 TMC4Q7Z404 712 aa12□□□□□ -0.49
CDH4-201ENST00000543233 ZNF713Q8N859 430 aaPredicted RBP12□□□□□ -0.49
CDH4-201ENST00000543233 GDAP1Q8TB36 358 aa12□□□□□ -0.49
CDH4-201ENST00000543233 RXFP1Q9HBX9 757 aa12□□□□□ -0.49
CDH4-201ENST00000543233 ARL2BPQ9Y2Y0 163 aa12□□□□□ -0.49
CDH4-201ENST00000543233 IVNS1ABPQ9Y6Y0 642 aa12□□□□□ -0.49
CDH4-201ENST00000543233 UNCXA6NJT0 531 aa12□□□□□ -0.49
CDH4-201ENST00000543233 CAPN9O14815 690 aa12□□□□□ -0.49
CDH4-201ENST00000543233 MED24O75448 989 aa12□□□□□ -0.49
CDH4-201ENST00000543233 SMARCA1P28370 1054 aa12□□□□□ -0.49
CDH4-201ENST00000543233 INAQ16352 499 aa12□□□□□ -0.49
CDH4-201ENST00000543233 GALNTL6Q49A17 601 aa12□□□□□ -0.49
CDH4-201ENST00000543233 VWA3BQ502W6 1294 aa12□□□□□ -0.49
CDH4-201ENST00000543233 DACT2Q5SW24 774 aa12□□□□□ -0.49
CDH4-201ENST00000543233 MARK2Q7KZI7 788 aaKnown RBP12□□□□□ -0.49
CDH4-201ENST00000543233 ASRGL1Q7L266 308 aa12□□□□□ -0.49
CDH4-201ENST00000543233 TREML1Q86YW5 311 aa12□□□□□ -0.49
CDH4-201ENST00000543233 SIAH1Q8IUQ4 282 aa12□□□□□ -0.49
CDH4-201ENST00000543233 ATXN2LQ8WWM7 1075 aaKnown RBP12□□□□□ -0.49
CDH4-201ENST00000543233 RSPH1Q8WYR4 309 aa12□□□□□ -0.49
CDH4-201ENST00000543233 STMN2Q93045 179 aa12□□□□□ -0.49
CDH4-201ENST00000543233 POLR3CQ9BUI4 534 aaPredicted RBP12□□□□□ -0.49
CDH4-201ENST00000543233 EIF2AQ9BY44 585 aaKnown RBP12□□□□□ -0.49
CDH4-201ENST00000543233 SH2D4AQ9H788 454 aa12□□□□□ -0.49
CDH4-201ENST00000543233 DCLRE1BQ9H816 532 aa12□□□□□ -0.49
CDH4-201ENST00000543233 STK17AQ9UEE5 414 aa12□□□□□ -0.49
CDH4-201ENST00000543233 ZNF148Q9UQR1 794 aa12□□□□□ -0.49
CDH4-201ENST00000543233 MAST2Q6P0Q8 1798 aa12□□□□□ -0.49
CDH4-201ENST00000543233 LRRC53A6NM62 1247 aa12□□□□□ -0.49
CDH4-201ENST00000543233 OR6B1O95007 311 aa12□□□□□ -0.49
CDH4-201ENST00000543233 UNC5CO95185 931 aa12□□□□□ -0.49
CDH4-201ENST00000543233 PDGFRBP09619 1106 aa12□□□□□ -0.49
CDH4-201ENST00000543233 VPS41P49754 854 aa12□□□□□ -0.49
CDH4-201ENST00000543233 PMS2P54278 862 aa12□□□□□ -0.49
CDH4-201ENST00000543233 ARHGAP4P98171 946 aa12□□□□□ -0.49
CDH4-201ENST00000543233 NSUN2Q08J23 767 aaKnown RBP eCLIP12□□□□□ -0.496e-8■■■■■ 34.1
CDH4-201ENST00000543233 DNAAF5Q86Y56 855 aa12□□□□□ -0.49
CDH4-201ENST00000543233 SAMD3Q8N6K7 520 aa12□□□□□ -0.49
CDH4-201ENST00000543233 CXorf38Q8TB03 319 aa12□□□□□ -0.49
CDH4-201ENST00000543233 ACER1Q8TDN7 264 aa12□□□□□ -0.49
CDH4-201ENST00000543233 DQX1Q8TE96 717 aaKnown RBP12□□□□□ -0.49
CDH4-201ENST00000543233 PPP1R14BQ96C90 147 aa12□□□□□ -0.49
CDH4-201ENST00000543233 DNAJC7Q99615 494 aa12□□□□□ -0.49
CDH4-201ENST00000543233 TSG101Q99816 390 aa12□□□□□ -0.49
CDH4-201ENST00000543233 NEUROG2Q9H2A3 272 aa12□□□□□ -0.49
CDH4-201ENST00000543233 IKZF4Q9H2S9 585 aa12□□□□□ -0.49
CDH4-201ENST00000543233 ITGB1BP2Q9UKP3 347 aa12□□□□□ -0.49
CDH4-201ENST00000543233 BRWD3Q6RI45 1802 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 THSD7AQ9UPZ6 1657 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 A0A1W2PQC6 194 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 A0A1W2PRG0 241 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 EIF4A3P38919 411 aaKnown RBP11.99□□□□□ -0.49
CDH4-201ENST00000543233 CENPPQ6IPU0 288 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 LRRC74BQ6ZQY2 392 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 FBXO11Q86XK2 927 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDH4-201ENST00000543233 CENPTQ96BT3 561 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 ERP27Q96DN0 273 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 SNX27Q96L92 541 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 CCDC17Q96LX7 622 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 ZDHHC15Q96MV8 337 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 DENND2DQ9H6A0 471 aaPredicted RBP11.99□□□□□ -0.49
CDH4-201ENST00000543233 MAGEF1Q9HAY2 307 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 TRPV5Q9NQA5 729 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 PCDHA13Q9Y5I0 950 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 DAPK3O43293 454 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 DKC1O60832 514 aaKnown RBP eCLIP11.99□□□□□ -0.49
CDH4-201ENST00000543233 PORP16435 677 aaPredicted RBP11.99□□□□□ -0.49
CDH4-201ENST00000543233 EPS15P42566 896 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 TRPC1P48995 793 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 GEMIN4P57678 1058 aaKnown RBP11.99□□□□□ -0.49
CDH4-201ENST00000543233 IFI35P80217 286 aaPredicted RBP11.99□□□□□ -0.49
CDH4-201ENST00000543233 FOXD4Q12950 439 aaPredicted RBP11.99□□□□□ -0.49
CDH4-201ENST00000543233 ILDR2Q71H61 639 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 OTUD6AQ7L8S5 288 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 RBM46Q8TBY0 533 aaKnown RBP11.99□□□□□ -0.49
CDH4-201ENST00000543233 NCSTNQ92542 709 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 ISCUQ9H1K1 167 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 SUGT1Q9Y2Z0 365 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 ADAMTSL1Q8N6G6 1762 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 PASKQ96RG2 1323 aa11.99□□□□□ -0.49
CDH4-201ENST00000543233 AFPP02771 609 aaKnown RBP11.98□□□□□ -0.49
CDH4-201ENST00000543233 NT5C2P49902 561 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 NEK3P51956 506 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 ARFIP2P53365 341 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 ZNF572Q7Z3I7 529 aaPredicted RBP11.98□□□□□ -0.49
CDH4-201ENST00000543233 AGGF1Q8N302 714 aaeCLIP11.98□□□□□ -0.49
CDH4-201ENST00000543233 GATA6Q92908 595 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.98□□□□□ -0.49
CDH4-201ENST00000543233 TLR10Q9BXR5 811 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 KCNK9Q9NPC2 374 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 RSPH10B2B2RC85 870 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 FAM86B1E9PN63 330 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 MEIS2O14770 477 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 ZNF263O14978 683 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 ZBTB39O15060 712 aa11.98□□□□□ -0.49
CDH4-201ENST00000543233 KRT36O76013 467 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms