RNA–Protein interactions for RNA: ENST00000543162.1

DDB1-221, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 4

Gene DDB1, Length 575 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-221ENST00000543162 C4BPAP04003 597 aaKnown RBP11.53□□□□□ -0.56
DDB1-221ENST00000543162 SLC9A1P19634 815 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 IBSPP21815 317 aaPredicted RBP11.53□□□□□ -0.56
DDB1-221ENST00000543162 PIK3CAP42336 1068 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 GSDMDP57764 484 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TBX2Q13207 712 aaPredicted RBP11.53□□□□□ -0.56
DDB1-221ENST00000543162 EPC2Q52LR7 807 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 FIGNQ5HY92 759 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TDRD10Q5VZ19 366 aaKnown RBP11.53□□□□□ -0.56
DDB1-221ENST00000543162 TRIM65Q6PJ69 517 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 C15orf39Q6ZRI6 1047 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 SLC24A5Q71RS6 500 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TRAPPC11Q7Z392 1133 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 DEFB128Q7Z7B8 93 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 RTN4RL1Q86UN2 441 aaPredicted RBP11.53□□□□□ -0.56
DDB1-221ENST00000543162 ECHDC2Q86YB7 292 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 NT5DC4Q86YG4 428 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 RNF169Q8NCN4 708 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 EHBP1Q8NDI1 1231 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TAS1R2Q8TE23 839 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 CPLX3Q8WVH0 158 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TRIM43Q96BQ3 446 aaPredicted RBP11.53□□□□□ -0.56
DDB1-221ENST00000543162 KIF12Q96FN5 646 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TSPAN18Q96SJ8 248 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
DDB1-221ENST00000543162 PLCB1Q9NQ66 1216 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 C1orf112Q9NSG2 853 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 RAB20Q9NX57 234 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 CNTN3Q9P232 1028 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 COQ4Q9Y3A0 265 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 C2CD2Q9Y426 696 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 SCN5AQ14524 2016 aa11.53□□□□□ -0.56
DDB1-221ENST00000543162 C9IYK1 514 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 HLA-DRAP01903 254 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 GYPCP04921 128 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 ACTN1P12814 892 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 KCNE1P15382 129 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 TRPC3Q13507 836 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 XKR4Q5GH76 650 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 ALKAL1Q6UXT8 129 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 AGMOQ6ZNB7 445 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 CCDC186Q7Z3E2 898 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 TMEM199Q8N511 208 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 LMO3Q8TAP4 145 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 LINC01599Q8WXQ3 324 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 SEMA4DQ92854 862 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 LPPQ93052 612 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 RPS6KC1Q96S38 1066 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 EDEM3Q9BZQ6 932 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 UBN1Q9NPG3 1134 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 PRKAG2Q9UGJ0 569 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 CAPN11Q9UMQ6 739 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 GIT1Q9Y2X7 761 aa11.52□□□□□ -0.57
DDB1-221ENST00000543162 LUC7L2Q9Y383 392 aaKnown RBP11.52□□□□□ -0.57
DDB1-221ENST00000543162 TRIP11Q15643 1979 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 SMIM28A0A1B0GU29 152 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 A0A1W2PQJ5 194 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 MEIS3P2A8K0S8 358 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 AKR1B15C9JRZ8 316 aaPredicted RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 ENPP3O14638 875 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 EPHB6O15197 1021 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 XPOTO43592 962 aaKnown RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 ZC3H11AO75152 810 aaKnown RBP eCLIP11.51□□□□□ -0.57
DDB1-221ENST00000543162 NOL4O94818 638 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 CLSTN1O94985 981 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 VNN1O95497 513 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 EOMESO95936 686 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 UCHL3P15374 230 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 ATF7P17544 494 aaPredicted RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 CASP14P31944 242 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 MLH1P40692 756 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 FXR1P51114 621 aaKnown RBP eCLIP11.51□□□□□ -0.572e-6■■■□□ 17.6
DDB1-221ENST00000543162 POLR2FP61218 127 aaKnown RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 FAM189BP81408 668 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 APBA1Q02410 837 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 LRMPQ12912 555 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 NCOA4Q13772 614 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 WDR44Q5JSH3 913 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 GLRA4Q5JXX5 417 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 COL13A1Q5TAT6 717 aaPredicted RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 KLHDC7AQ5VTJ3 777 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 MFSD5Q6N075 450 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 CNKSR3Q6P9H4 555 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 CACNA2D4Q7Z3S7 1137 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 ZNF598Q86UK7 904 aaKnown RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 CNGA4Q8IV77 575 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 CCDC150Q8NCX0 1101 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 ZNF397Q8NF99 534 aaPredicted RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 BEST2Q8NFU1 509 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 ABHD8Q96I13 439 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 ZMAT2Q96NC0 199 aaKnown RBP11.51□□□□□ -0.57
DDB1-221ENST00000543162 NT5C1BQ96P26 610 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 GAD1Q99259 594 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 IMPG2Q9BZV3 1241 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 TTYH3Q9C0H2 523 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 CXCL16Q9H2A7 254 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 GANQ9H2C0 597 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 RSAD1Q9HA92 442 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 SIX2Q9NPC8 291 aa11.51□□□□□ -0.57
DDB1-221ENST00000543162 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.51□□□□□ -0.576e-9■■■■■ 58.7
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms