RNA–Protein interactions for RNA: ENST00000542133.5

NPIPB4-215, Transcript of nuclear pore complex interacting protein family member B4, humanhuman

TSL 3

Gene NPIPB4, Length 910 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4-215ENST00000542133 SFPQP23246 707 aaKnown RBP eCLIP8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 ATICP31939 592 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 HNRNPUQ00839 825 aaKnown RBP eCLIP8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 ZNF252P-AS1Q0IIN9 211 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 DNTTIP2Q5QJE6 756 aaKnown RBP8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 GLYCTKQ8IVS8 523 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 NPAS3Q8IXF0 933 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 DNASE1L2Q92874 299 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 PGBD1Q96JS3 809 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 B3GALT6Q96L58 329 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 RSAD1Q9HA92 442 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 CASS4Q9NQ75 786 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 CHST7Q9NS84 486 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 FBXW11Q9UKB1 542 aa8.58□□□□□ -1.04
NPIPB4-215ENST00000542133 CNTNAP2Q9UHC6 1331 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 BPTFQ12830 3046 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 ERICH2A1L162 156 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 MAN2B1O00754 1011 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 ECI2O75521 394 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 PLEKHA8P1O95397 391 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 TOP3BO95985 862 aaKnown RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 POMCP01189 267 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 HNRNPA1P09651 372 aaKnown RBP eCLIP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 ZNF806P0C7X5 589 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 SMARCA1P28370 1054 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 ERCC5P28715 1186 aaPredicted RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 OR1G1P47890 313 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 CXCL12P48061 93 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 NOVA1P51513 510 aaKnown RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 MARSP56192 900 aaKnown RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 DRP2Q13474 957 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 GAS6Q14393 721 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 CCDC6Q16204 474 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 CCDC92Q53HC0 331 aaPredicted RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 SOWAHCQ53LP3 525 aaPredicted RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 CWC27Q6UX04 472 aaKnown RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 CATIPQ7Z7H3 387 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 LONP2Q86WA8 852 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 COLGALT2Q8IYK4 626 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 CTCFLQ8NI51 663 aaPredicted RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 PGBD4Q96DM1 585 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 FAM167AQ96KS9 214 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 FAM193BQ96PV7 902 aaPredicted RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 ANO3Q9BYT9 981 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 GCOM2Q9BZD3 368 aaPredicted RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 PLA2G2FQ9BZM2 168 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 ARRDC1-AS1Q9H2J1 176 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 ZHX3Q9H4I2 956 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 CXorf56Q9H5V9 222 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 FNIP2Q9P278 1114 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 SEPT9Q9UHD8 586 aaPredicted RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 G3BP2Q9UN86 482 aaKnown RBP8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 PCDHB2Q9Y5E7 798 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 NOTCH4Q99466 2003 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 LAMA1P25391 3075 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 FREM2Q5SZK8 3169 aa8.57□□□□□ -1.04
NPIPB4-215ENST00000542133 TICRRQ7Z2Z1 1910 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 A0A087WZ62 844 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 K7ESF4 209 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 GIPC1O14908 333 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 MAP3K7O43318 606 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 DDAH1O94760 285 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 EPN2O95208 641 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 PAPSS2O95340 614 aaPredicted RBP8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 OATP04181 439 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 C8AP07357 584 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 RPL17P18621 184 aaKnown RBP8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 HOXA9P31269 272 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 SREBF1P36956 1147 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 HMGN5P82970 282 aaKnown RBP8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 DSC1Q08554 894 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 TCEAL1Q15170 157 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 LIN9Q5TKA1 542 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 ZNF746Q6NUN9 644 aaPredicted RBP8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 CCDC73Q6ZRK6 1079 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 CEP68Q76N32 757 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 NIPA1Q7RTP0 329 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 KRT77Q7Z794 578 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 MRPL10Q7Z7H8 261 aaKnown RBP8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 LAPTM4BQ86VI4 370 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 GPR65Q8IYL9 337 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 SRBD1Q8N5C6 995 aaKnown RBP8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 RILPL2Q969X0 211 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 MAP3K14Q99558 947 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 ARPC5LQ9BPX5 153 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 FDXACB1Q9BRP7 624 aaPredicted RBP8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 LMAN1LQ9HAT1 526 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 AGPAT5Q9NUQ2 364 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 KANSL3Q9P2N6 904 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 NAV2Q8IVL1 2488 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 SPAG17Q6Q759 2223 aa8.56□□□□□ -1.04
NPIPB4-215ENST00000542133 IGLV3-22A0A075B6J6 115 aa8.55□□□□□ -1.04
NPIPB4-215ENST00000542133 hCG_1642624A0A1W2PR95 340 aa8.55□□□□□ -1.04
NPIPB4-215ENST00000542133 VGLL3A8MV65 326 aa8.55□□□□□ -1.04
NPIPB4-215ENST00000542133 FAM86B1E9PN63 330 aa8.55□□□□□ -1.04
NPIPB4-215ENST00000542133 IPO5O00410 1097 aaKnown RBP8.55□□□□□ -1.04
NPIPB4-215ENST00000542133 AXIN1O15169 862 aa8.55□□□□□ -1.04
NPIPB4-215ENST00000542133 CCL16O15467 120 aa8.55□□□□□ -1.04
NPIPB4-215ENST00000542133 KIF1CO43896 1103 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms