RNA–Protein interactions for RNA: ENST00000541354.5

SPOCK3-226, Transcript of SPARC (osteonectin), cwcv and kazal like domains proteoglycan 3, humanhuman

TSL 2 BASIC

Gene SPOCK3, Length 2,797 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOCK3-226ENST00000541354 GCLMP48507 274 aa15.77■□□□□ 0.11
SPOCK3-226ENST00000541354 TNFAIP2Q03169 654 aa15.77■□□□□ 0.11
SPOCK3-226ENST00000541354 EMC10Q5UCC4 262 aa15.77■□□□□ 0.11
SPOCK3-226ENST00000541354 IQCKQ8N0W5 287 aa15.77■□□□□ 0.11
SPOCK3-226ENST00000541354 WHAMMQ8TF30 809 aa15.77■□□□□ 0.11
SPOCK3-226ENST00000541354 FAM124BQ9H5Z6 455 aaPredicted RBP15.77■□□□□ 0.11
SPOCK3-226ENST00000541354 IGF2BP3O00425 579 aaKnown RBP eCLIP15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 MATR3P43243 847 aaKnown RBP eCLIP15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 HADHBP55084 474 aaKnown RBP15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 ZNF677Q86XU0 584 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 WDR49Q8IV35 697 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 RDH13Q8NBN7 331 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 COPS5Q92905 334 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 SAAL1Q96ER3 474 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 FNBP1Q96RU3 617 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 APBA2Q99767 749 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 MSTO1Q9BUK6 570 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 PTPRHQ9HD43 1115 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 CCDC188H7C350 402 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 SORBS3O60504 671 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 KPNA6O60684 536 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 TMEM253P0C7T8 217 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 PPFIA1Q13136 1202 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 CRELD2Q6UXH1 353 aaPredicted RBP15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 OR6J1Q8NGC5 347 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 NPLOC4Q8TAT6 608 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 LNX1Q8TBB1 728 aaPredicted RBP15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 HES6Q96HZ4 224 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 FAM213AQ9BRX8 229 aa15.76■□□□□ 0.11
SPOCK3-226ENST00000541354 A6NNZ2 444 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 ABLIM1O14639 778 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 CLDN3O15551 220 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 PHACTR2O75167 634 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 HEXIM1O94992 359 aaKnown RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 IL18RAPO95256 599 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 C4BPAP04003 597 aaKnown RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 SMPD1P17405 629 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 ADCYAP1R1P41586 468 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 BPIFB4P59827 614 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 NKX3-2P78367 333 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 TUBB8Q3ZCM7 444 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 EFCAB12Q6NXP0 572 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 MPZL3Q6UWV2 235 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 SV2AQ7L0J3 742 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 APBB1IPQ7Z5R6 666 aaPredicted RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 AFG1LQ8WV93 481 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 GNEQ9Y223 722 aaKnown RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 MGAMO43451 1857 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 FAM155AB1AL88 458 aaPredicted RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 FAM189A1O60320 539 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 GZMAP12544 262 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 INSRRP14616 1297 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 TBXAS1P24557 533 aaPredicted RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 NT5DC3Q86UY8 548 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 TSEN2Q8NCE0 465 aaKnown RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 FAM76AQ8TAV0 307 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 HELQQ8TDG4 1101 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 UBE2TQ9NPD8 197 aaPredicted RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 RBAKQ9NYW8 714 aaPredicted RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 CNTNAP2Q9UHC6 1331 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 GOLGA8IPA6NC78 632 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 GOLGA8JA6NMD2 632 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 ZEB2O60315 1214 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 MCF2P10911 925 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 LRRC31Q6UY01 552 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 RIN2Q8WYP3 895 aaPredicted RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 GDAP1L1Q96MZ0 367 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 TARS2Q9BW92 718 aaKnown RBP15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 ISCUQ9H1K1 167 aa15.75■□□□□ 0.11
SPOCK3-226ENST00000541354 H3BRB1 525 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 CARSP49589 748 aaKnown RBP15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 SKOR1P84550 965 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 MBTD1Q05BQ5 628 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 WDR44Q5JSH3 913 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 GJB7Q6PEY0 223 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 MTHFD1LQ6UB35 978 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 METTL13Q8N6R0 699 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 RNF149Q8NC42 400 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 CASKIN2Q8WXE0 1202 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 KRT12Q99456 494 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 TUT1Q9H6E5 874 aaKnown RBP15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 EPB41L5Q9HCM4 733 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 GOLGA6CA6NDK9 693 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 KCNK3O14649 394 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 HSF2BPO75031 334 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 GOLGA6DP0CG33 693 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 GALCP54803 685 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 CUL1Q13616 776 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 TRMT1LQ7Z2T5 733 aaKnown RBP15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 TRIM50Q86XT4 487 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 RFFLQ8WZ73 363 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 SEC14L1Q92503 715 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 TSPAN18Q96SJ8 248 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 AGPAT1Q99943 283 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 RNPEPQ9H4A4 650 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 GOLGA6AQ9NYA3 693 aa15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 CPSF3Q9UKF6 684 aaKnown RBP15.74■□□□□ 0.11
SPOCK3-226ENST00000541354 PACSIN2Q9UNF0 486 aaPredicted RBP15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 73.6 ms