RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 PHLDB3Q6NSJ2 640 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 KCNG4Q8TDN1 519 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 UROC1Q96N76 676 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 CCDC94Q9BW85 323 aaPredicted RBP26.35■■□□□ 1.81
LEMD3-203ENST00000541171 PCDHB6Q9Y5E3 794 aa26.35■■□□□ 1.81
LEMD3-203ENST00000541171 VWA8A3KMH1 1905 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 PP2D1A8MPX8 630 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 TRAPPC3O43617 180 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 HIP1RO75146 1068 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 NPTX2P47972 431 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 ZNF568Q3ZCX4 644 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 C3orf58Q8NDZ4 430 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 SNX27Q96L92 541 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 ACO2Q99798 780 aaKnown RBP26.34■■□□□ 1.81
LEMD3-203ENST00000541171 RAB34Q9BZG1 259 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 FOXQ1Q9C009 403 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 CDT1Q9H211 546 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 DNMT3BQ9UBC3 853 aaKnown RBP26.34■■□□□ 1.81
LEMD3-203ENST00000541171 DNM3Q9UQ16 869 aa26.34■■□□□ 1.81
LEMD3-203ENST00000541171 GRM5P41594 1212 aa26.33■■□□□ 1.81
LEMD3-203ENST00000541171 TOB1P50616 345 aaPredicted RBP26.33■■□□□ 1.81
LEMD3-203ENST00000541171 SOX4Q06945 474 aaPredicted RBP26.33■■□□□ 1.81
LEMD3-203ENST00000541171 SNW1Q13573 536 aaKnown RBP26.33■■□□□ 1.81
LEMD3-203ENST00000541171 UVSSAQ2YD98 709 aa26.33■■□□□ 1.81
LEMD3-203ENST00000541171 PABPC1LQ4VXU2 614 aaKnown RBP26.33■■□□□ 1.81
LEMD3-203ENST00000541171 MTSS1LQ765P7 747 aa26.33■■□□□ 1.81
LEMD3-203ENST00000541171 ING5Q8WYH8 240 aa26.33■■□□□ 1.81
LEMD3-203ENST00000541171 DDX27Q96GQ7 796 aaKnown RBP26.33■■□□□ 1.81
LEMD3-203ENST00000541171 TCHPQ9BT92 498 aa26.33■■□□□ 1.81
LEMD3-203ENST00000541171 TARS2Q9BW92 718 aaKnown RBP26.33■■□□□ 1.81
LEMD3-203ENST00000541171 KMT5AQ9NQR1 393 aa26.33■■□□□ 1.81
LEMD3-203ENST00000541171 TOPORSQ9NS56 1045 aaPredicted RBP26.33■■□□□ 1.81
LEMD3-203ENST00000541171 STK24Q9Y6E0 443 aa26.33■■□□□ 1.81
LEMD3-203ENST00000541171 PHLPP2Q6ZVD8 1323 aa26.33■■□□□ 1.81
LEMD3-203ENST00000541171 CDC25AP30304 524 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 KRT79Q5XKE5 535 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 ANKS3Q6ZW76 656 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 DAW1Q8N136 415 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 IGSF22Q8N9C0 903 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 KXD1Q9BQD3 176 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 RUSC1Q9BVN2 902 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 MRPL4Q9BYD3 311 aaKnown RBP26.32■■□□□ 1.8
LEMD3-203ENST00000541171 SH2B1Q9NRF2 756 aaPredicted RBP26.32■■□□□ 1.8
LEMD3-203ENST00000541171 BACE2Q9Y5Z0 518 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 R4GN57 208 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 DMDP11532 3685 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 VPS13AQ96RL7 3174 aa26.32■■□□□ 1.8
LEMD3-203ENST00000541171 LRRN2O75325 713 aa26.31■■□□□ 1.8
LEMD3-203ENST00000541171 HARSP12081 509 aaKnown RBP26.31■■□□□ 1.8
LEMD3-203ENST00000541171 U2AF2P26368 475 aaKnown RBP eCLIP26.31■■□□□ 1.8
LEMD3-203ENST00000541171 ARPP19P56211 112 aa26.31■■□□□ 1.8
LEMD3-203ENST00000541171 DMP1Q13316 513 aaPredicted RBP26.31■■□□□ 1.8
LEMD3-203ENST00000541171 ZRSR1Q15695 479 aaKnown RBP26.31■■□□□ 1.8
LEMD3-203ENST00000541171 TAS1R3Q7RTX0 852 aa26.31■■□□□ 1.8
LEMD3-203ENST00000541171 SHDQ96IW2 340 aa26.31■■□□□ 1.8
LEMD3-203ENST00000541171 TMEM134Q9H6X4 195 aa26.31■■□□□ 1.8
LEMD3-203ENST00000541171 PTPRHQ9HD43 1115 aa26.31■■□□□ 1.8
LEMD3-203ENST00000541171 DLGAP2Q9P1A6 1054 aa26.31■■□□□ 1.8
LEMD3-203ENST00000541171 DAXXQ9UER7 740 aaPredicted RBP26.31■■□□□ 1.8
LEMD3-203ENST00000541171 SFI1A8K8P3 1242 aa26.3■■□□□ 1.8
LEMD3-203ENST00000541171 PODXLO00592 558 aa26.3■■□□□ 1.8
LEMD3-203ENST00000541171 STARD6P59095 220 aa26.3■■□□□ 1.8
LEMD3-203ENST00000541171 IL17AQ16552 155 aa26.3■■□□□ 1.8
LEMD3-203ENST00000541171 ALKAL1Q6UXT8 129 aa26.3■■□□□ 1.8
LEMD3-203ENST00000541171 NPAS3Q8IXF0 933 aa26.3■■□□□ 1.8
LEMD3-203ENST00000541171 PJA1Q8NG27 643 aa26.3■■□□□ 1.8
LEMD3-203ENST00000541171 ZMAT2Q96NC0 199 aaKnown RBP26.3■■□□□ 1.8
LEMD3-203ENST00000541171 MRPS23Q9Y3D9 190 aaKnown RBP26.3■■□□□ 1.8
LEMD3-203ENST00000541171 SPTBN4Q9H254 2564 aa26.3■■□□□ 1.8
LEMD3-203ENST00000541171 TRIP11Q15643 1979 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 SLC16A4O15374 487 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 POU2F2P09086 479 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 GLULP15104 373 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 XKR4Q5GH76 650 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 RINT1Q6NUQ1 792 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 DTHD1Q6ZMT9 781 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 KCNK18Q7Z418 384 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 MCRS1Q96EZ8 462 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 DRC1Q96MC2 740 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 ACAP3Q96P50 834 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 SLC38A7Q9NVC3 462 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 ARHGAP28Q9P2N2 729 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 KCNH3Q9ULD8 1083 aa26.29■■□□□ 1.8
LEMD3-203ENST00000541171 MCF2P10911 925 aa26.28■■□□□ 1.8
LEMD3-203ENST00000541171 ELF1P32519 619 aa26.28■■□□□ 1.8
LEMD3-203ENST00000541171 ROR1Q01973 937 aa26.28■■□□□ 1.8
LEMD3-203ENST00000541171 SLC44A4Q53GD3 710 aa26.28■■□□□ 1.8
LEMD3-203ENST00000541171 VARS2Q5ST30 1063 aaKnown RBP26.28■■□□□ 1.8
LEMD3-203ENST00000541171 C1orf210Q8IVY1 113 aa26.28■■□□□ 1.8
LEMD3-203ENST00000541171 ZBTB45Q96K62 511 aaPredicted RBP26.28■■□□□ 1.8
LEMD3-203ENST00000541171 RBM19Q9Y4C8 960 aaKnown RBP26.28■■□□□ 1.8
LEMD3-203ENST00000541171 LMNAP02545 664 aaKnown RBP26.27■■□□□ 1.8
LEMD3-203ENST00000541171 LRG1P02750 347 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 RHOP08100 348 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 SP9P0CG40 484 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 RAD51AP2Q09MP3 1159 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 MAPK7Q13164 816 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 MLF2Q15773 248 aaPredicted RBP26.27■■□□□ 1.8
LEMD3-203ENST00000541171 MPZL3Q6UWV2 235 aa26.27■■□□□ 1.8
LEMD3-203ENST00000541171 C1orf186Q6ZWK4 172 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms