RNA–Protein interactions for RNA: ENST00000540998.5

CDC42SE1-207, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CDC42SE1, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-207ENST00000540998 ZFYVE27Q5T4F4 411 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 RHBDF2Q6PJF5 856 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 TMEM179Q6ZVK1 233 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 CKAP2Q8WWK9 683 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 WNT8AQ9H1J5 351 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 MROH7Q68CQ1 1323 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 RASA4BC9J798 803 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 NFIBO00712 420 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 RASA4O43374 803 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 POLR2MP0CAP2 368 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 ATF2P15336 505 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 TAC1P20366 129 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 ABL2P42684 1182 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 WNT7BP56706 349 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 CYP1B1Q16678 543 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 SYCP2LQ5T4T6 812 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 FAM102BQ5T8I3 360 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 CPXCR1Q8N123 301 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 XXYLT1Q8NBI6 393 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 SPDL1Q96EA4 605 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 PRMT6Q96LA8 375 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 KLF6Q99612 283 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 CCDC134Q9H6E4 229 aa11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.05□□□□□ -0.64
CDC42SE1-207ENST00000540998 MAP3K13O43283 966 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 GRIN3BO60391 1043 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 GSTA1P08263 222 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 SNRNP35Q16560 246 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 MFSD5Q6N075 450 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 INTS8Q75QN2 995 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 MIER3Q7Z3K6 550 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 HELQQ8TDG4 1101 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 P3H4Q92791 437 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 RSRC1Q96IZ7 334 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 RPS6KC1Q96S38 1066 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 STRA6Q9BX79 667 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 TAOK3Q9H2K8 898 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 SCN9AQ15858 1988 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 EME2A4GXA9 379 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 CYP1A2P05177 515 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 EFTUD2Q15029 972 aaKnown RBP eCLIP11.04□□□□□ -0.641e-8■■■□□ 19.1
CDC42SE1-207ENST00000540998 TATDN1Q6P1N9 297 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 TTC8Q8TAM2 541 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 DDX1Q92499 740 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 SNF8Q96H20 258 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 C11orf70Q9BRQ4 267 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 KCNH7Q9NS40 1196 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 PARP2Q9UGN5 583 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 ARL2BPQ9Y2Y0 163 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 CENPFP49454 3210 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 A0A1W2PPM1 405 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 ENO4A6NNW6 628 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 GOLGA8RI6L899 631 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 RARRES1P49788 294 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 MMP14P50281 582 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 SESN3P58005 492 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 OVGP1Q12889 678 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 PKN2Q16513 984 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 PPP2R5EQ16537 467 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 SPDYCQ5MJ68 293 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 ANKRD20A2Q5SQ80 823 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 ANKRD20A1Q5TYW2 823 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 ANKRD20A3Q5VUR7 823 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 IZUMO3Q5VZ72 239 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 HHIPL2Q6UWX4 724 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 MAGEC3Q8TD91 643 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 PITPNM3Q9BZ71 974 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 DCLK3Q9C098 648 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 LRRC19Q9H756 370 aa11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 SAE1Q9UBE0 346 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-207ENST00000540998 SPATA31A6Q5VVP1 1343 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 A0A1B0GUA9 196 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 CCDC189A1A4V9 331 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 PDHA1P08559 390 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 P3H1Q32P28 736 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 BTNL9Q6UXG8 535 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 GSTA5Q7RTV2 222 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 ANKMY2Q8IV38 441 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 SP8Q8IXZ3 490 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 BSNDQ8WZ55 320 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 SHC3Q92529 594 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 GMCL1Q96IK5 515 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 ZDHHC15Q96MV8 337 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 TEKT3Q9BXF9 490 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 SAYSD1Q9NPB0 183 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 ARHGEF3Q9NR81 526 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 NOP53Q9NZM5 478 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 CHKBQ9Y259 395 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 RBBP6Q7Z6E9 1792 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 C2orf71A6NGG8 1288 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 FSCN2O14926 492 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 ATP9AO75110 1047 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 EIF2AK2P19525 551 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 EPHB2P29323 1055 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 HOXA10P31260 410 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 NRLP54845 237 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 NOP14P78316 857 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 CETN1Q12798 172 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 SEZ6Q53EL9 994 aa11.03□□□□□ -0.64
CDC42SE1-207ENST00000540998 MIS18BP1Q6P0N0 1132 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms