RNA–Protein interactions for RNA: ENST00000540918.2

TTC39C-203, Transcript of tetratricopeptide repeat domain 39C, humanhuman

TSL 2 BASIC

Gene TTC39C, Length 4,117 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-203ENST00000540918 COL14A1Q05707 1796 aaKnown RBP10.15□□□□□ -0.78
TTC39C-203ENST00000540918 CXCL11O14625 94 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 SLC16A3O15427 465 aaKnown RBP10.15□□□□□ -0.78
TTC39C-203ENST00000540918 EXTL3O43909 919 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 ZBED1O96006 694 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 SNHG28P0DPA3 235 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 CPB1P15086 417 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 PPP3CAQ08209 521 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 CC2D1AQ6P1N0 951 aaPredicted RBP10.15□□□□□ -0.78
TTC39C-203ENST00000540918 ANO5Q75V66 913 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 MAIP1Q8WWC4 291 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 ATG4AQ8WYN0 398 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 CFAP36Q96G28 342 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 KIAA0100Q14667 2235 aaKnown RBP10.15□□□□□ -0.78
TTC39C-203ENST00000540918 EIF3DO15371 548 aaKnown RBP eCLIP10.15□□□□□ -0.78
TTC39C-203ENST00000540918 TADA3O75528 432 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 ACAT1P24752 427 aaKnown RBP10.15□□□□□ -0.78
TTC39C-203ENST00000540918 OR1G1P47890 313 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 CLUL1Q15846 466 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 DAB2IPQ5VWQ8 1189 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 CCDC137Q6PK04 289 aaKnown RBP10.15□□□□□ -0.78
TTC39C-203ENST00000540918 NSMCE1Q8WV22 266 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 C18orf8Q96DM3 657 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 TRIM11Q96F44 468 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 GINM1Q9NU53 330 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 SNTG2Q9NY99 539 aa10.15□□□□□ -0.78
TTC39C-203ENST00000540918 NDC80O14777 642 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 B4GALT5O43286 388 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 STAG3L1P0CL83 205 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 TBXAS1P24557 533 aaPredicted RBP10.14□□□□□ -0.79
TTC39C-203ENST00000540918 CCDC6Q16204 474 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 NT5DC1Q5TFE4 455 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 ASAP3Q8TDY4 903 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 PDCD6IPQ8WUM4 868 aaKnown RBP10.14□□□□□ -0.79
TTC39C-203ENST00000540918 MTMR8Q96EF0 704 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 AGAP3Q96P47 875 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 HSD17B14Q9BPX1 270 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 TRIM7Q9C029 511 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 KCND2Q9NZV8 630 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 PRKAG2Q9UGJ0 569 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 SSX2IPQ9Y2D8 614 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 POMCP01189 267 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 IVLP07476 585 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 GHRP10912 638 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 RRM1P23921 792 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 EPHB4P54760 987 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 NNTQ13423 1086 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 NAB2Q15742 525 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 CFAP157Q5JU67 520 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 ITIH6Q6UXX5 1313 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 SETD1AO15047 1707 aaKnown RBP10.14□□□□□ -0.79
TTC39C-203ENST00000540918 CASTOR2A6NHX0 329 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 MAGEB2O15479 319 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 KRT10P13645 584 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 GGCXP38435 758 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 RFC5P40937 340 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 SH2D3CQ8N5H7 860 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 GRK7Q8WTQ7 553 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 GLT1D1Q96MS3 346 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 SAYSD1Q9NPB0 183 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 ZSCAN5CA6NGD5 496 aaPredicted RBP10.14□□□□□ -0.79
TTC39C-203ENST00000540918 TOM1L1O75674 476 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 TNFSF9P41273 254 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 CCT5P48643 541 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 RBP5P82980 135 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 GPS1Q13098 491 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 SEPT6Q14141 434 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 ARHGEF6Q15052 776 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 SGSM1Q2NKQ1 1148 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 TRAPPC11Q7Z392 1133 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 DEFB128Q7Z7B8 93 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 ANKS4BQ8N8V4 417 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 ZSWIM2Q8NEG5 633 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 UPF1Q92900 1129 aaKnown RBP eCLIP10.14□□□□□ -0.79
TTC39C-203ENST00000540918 NSRP1Q9H0G5 558 aaKnown RBP10.14□□□□□ -0.79
TTC39C-203ENST00000540918 SCINQ9Y6U3 715 aa10.14□□□□□ -0.79
TTC39C-203ENST00000540918 FAM208AQ9UK61 1670 aaKnown RBP10.13□□□□□ -0.79
TTC39C-203ENST00000540918 OGTO15294 1046 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 RTN2O75298 545 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 CARSP49589 748 aaKnown RBP10.13□□□□□ -0.79
TTC39C-203ENST00000540918 HIRAP54198 1017 aaPredicted RBP10.13□□□□□ -0.79
TTC39C-203ENST00000540918 PDE1BQ01064 536 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 CCDC14Q49A88 953 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 ARHGEF18Q6ZSZ5 1173 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 NYAP1Q6ZVC0 841 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 MCUQ8NE86 351 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 REPS2Q8NFH8 660 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 PPP1R12CQ9BZL4 782 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 TAF1DQ9H5J8 278 aaPredicted RBP10.13□□□□□ -0.79
TTC39C-203ENST00000540918 PRMT7Q9NVM4 692 aaPredicted RBP10.13□□□□□ -0.79
TTC39C-203ENST00000540918 PLAAQ9Y263 795 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 ABCC6O95255 1503 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 SSU72P8A0A1W2PR75 194 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 PABPN1LA6NDY0 278 aaKnown RBP10.13□□□□□ -0.79
TTC39C-203ENST00000540918 HOXD10P28358 340 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 ELF1P32519 619 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 PDCLQ13371 301 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 MTMR3Q13615 1198 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 XRRA1Q6P2D8 792 aa10.13□□□□□ -0.79
TTC39C-203ENST00000540918 USP50Q70EL3 339 aaPredicted RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms