RNA–Protein interactions for RNA: ENST00000540756.5

TTC3-225, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 2 BASIC

Gene TTC3, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-225ENST00000540756 RPF1Q9H9Y2 349 aaKnown RBP26.47■■□□□ 1.83
TTC3-225ENST00000540756 TRIP11Q15643 1979 aa26.47■■□□□ 1.83
TTC3-225ENST00000540756 DDX3XO00571 662 aaKnown RBP eCLIP26.46■■□□□ 1.838e-8■■■■■ 36.6
TTC3-225ENST00000540756 KIF5CO60282 957 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 FKTNO75072 461 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 GNAT1P11488 350 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 EIF4BP23588 611 aaKnown RBP26.46■■□□□ 1.83
TTC3-225ENST00000540756 HSP90AA2PQ14568 343 aaPredicted RBP26.46■■□□□ 1.83
TTC3-225ENST00000540756 SNX17Q15036 470 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 DDX20Q9UHI6 824 aaKnown RBP26.46■■□□□ 1.83
TTC3-225ENST00000540756 UMODL1Q5DID0 1318 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 LACTBL1A8MY62 500 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 RIOK3O14730 519 aaKnown RBP26.46■■□□□ 1.83
TTC3-225ENST00000540756 MFAP3P55082 362 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 TRAPPC11Q7Z392 1133 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 SLC35F6Q8N357 371 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 LNX1Q8TBB1 728 aaPredicted RBP26.46■■□□□ 1.83
TTC3-225ENST00000540756 SLC20A1Q8WUM9 679 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 SYT11Q9BT88 431 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 CXCL16Q9H2A7 254 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 SALL4Q9UJQ4 1053 aa26.46■■□□□ 1.83
TTC3-225ENST00000540756 MACROD2A1Z1Q3 448 aa26.45■■□□□ 1.82
TTC3-225ENST00000540756 PHACTR2O75167 634 aa26.45■■□□□ 1.82
TTC3-225ENST00000540756 NCOA4Q13772 614 aa26.45■■□□□ 1.82
TTC3-225ENST00000540756 SHC3Q92529 594 aa26.45■■□□□ 1.82
TTC3-225ENST00000540756 ERO1AQ96HE7 468 aa26.45■■□□□ 1.82
TTC3-225ENST00000540756 EIF2AQ9BY44 585 aaKnown RBP26.45■■□□□ 1.82
TTC3-225ENST00000540756 DAAM1Q9Y4D1 1078 aa26.45■■□□□ 1.82
TTC3-225ENST00000540756 CYP26A1O43174 497 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 CALCAP01258 141 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 INHAP05111 366 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 NFICP08651 508 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 CDC42EP1Q00587 391 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 SLC10A6Q3KNW5 377 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 ZNF662Q6ZS27 426 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 GLYCTKQ8IVS8 523 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 FAM71AQ8IYT1 594 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 PXYLP1Q8TE99 480 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 NAGPAQ9UK23 515 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 NPTXRO95502 500 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 CLTAP09496 248 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 KIF5AQ12840 1032 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 DUOXA2Q1HG44 320 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 PALB2Q86YC2 1186 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 C1orf112Q9NSG2 853 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 NUB1Q9Y5A7 615 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 CITO14578 2027 aa26.44■■□□□ 1.82
TTC3-225ENST00000540756 MYH10P35580 1976 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 B4GALT4O60513 344 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 SGPL1O95470 568 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 TUBB4AP04350 444 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 CASQ1P31415 396 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 WDR44Q5JSH3 913 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 SLC47A2Q86VL8 602 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 HES2Q9Y543 173 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 KRT86O43790 486 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 ZC3H11AO75152 810 aaKnown RBP eCLIP26.43■■□□□ 1.82
TTC3-225ENST00000540756 MYL6P60660 151 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 JADE1Q6IE81 842 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 SLC30A5Q8TAD4 765 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 NENFQ9UMX5 172 aa26.43■■□□□ 1.82
TTC3-225ENST00000540756 CST5P28325 142 aaPredicted RBP26.42■■□□□ 1.82
TTC3-225ENST00000540756 GCNT1Q02742 428 aa26.42■■□□□ 1.82
TTC3-225ENST00000540756 CLSTN1O94985 981 aa26.41■■□□□ 1.82
TTC3-225ENST00000540756 CRYBB1P53674 252 aaPredicted RBP26.41■■□□□ 1.82
TTC3-225ENST00000540756 NOP14P78316 857 aaKnown RBP26.41■■□□□ 1.82
TTC3-225ENST00000540756 TAF2Q6P1X5 1199 aa26.41■■□□□ 1.82
TTC3-225ENST00000540756 ALKBH5Q6P6C2 394 aaKnown RBP26.41■■□□□ 1.82
TTC3-225ENST00000540756 U2AF1L4Q8WU68 220 aaKnown RBP26.41■■□□□ 1.82
TTC3-225ENST00000540756 ADPGKQ9BRR6 497 aa26.41■■□□□ 1.82
TTC3-225ENST00000540756 PTCH2Q9Y6C5 1203 aa26.41■■□□□ 1.82
TTC3-225ENST00000540756 GNRH1P01148 92 aa26.41■■□□□ 1.82
TTC3-225ENST00000540756 TMEM191BP0C7N4 346 aa26.41■■□□□ 1.82
TTC3-225ENST00000540756 SURF1Q15526 300 aa26.41■■□□□ 1.82
TTC3-225ENST00000540756 NOP9Q86U38 636 aaKnown RBP26.41■■□□□ 1.82
TTC3-225ENST00000540756 NME8Q8N427 588 aa26.41■■□□□ 1.82
TTC3-225ENST00000540756 TMCO5BA8MYB1 307 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 PJA2O43164 708 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 CTSHP09668 335 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 AP3M2P53677 418 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 BMS1Q14692 1282 aaKnown RBP26.4■■□□□ 1.82
TTC3-225ENST00000540756 ACAP3Q96P50 834 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 AGPAT1Q99943 283 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 CELF4Q9BZC1 486 aaKnown RBP26.4■■□□□ 1.82
TTC3-225ENST00000540756 OSBPL7Q9BZF2 842 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 RNF19AQ9NV58 838 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 SNTG2Q9NY99 539 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 TAS2R14Q9NYV8 317 aa26.4■■□□□ 1.82
TTC3-225ENST00000540756 PIN4Q9Y237 131 aaKnown RBP26.4■■□□□ 1.82
TTC3-225ENST00000540756 IL18RAPO95256 599 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 KRT5P13647 590 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 GUCY2FP51841 1108 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 NAB2Q15742 525 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 TAF3Q5VWG9 929 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 LHX8Q68G74 356 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 SLC27A1Q6PCB7 646 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 SERINC5Q86VE9 423 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 EPS8L1Q8TE68 723 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 VTI1AQ96AJ9 217 aa26.39■■□□□ 1.82
TTC3-225ENST00000540756 SEPT11Q9NVA2 429 aaKnown RBP26.39■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms